Gene Pfl01_0559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0559 
Symbol 
ID3712954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp653487 
End bp654620 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content64% 
IMG OID 
ProductN-acylglucosamine 2-epimerase 
Protein accessionYP_346292 
Protein GI77456787 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0708498 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.67916 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCACG CCTCCCGCTC CACCTCCCTG CCTGAACTGA CCGCCCTGTT CGGTGAAGTG 
CAACAGCACT TTCTCGACGT GATCGTGCCC CTCTGGCAAG GGCCGGGCTG GAACGCCGAC
ATGGCGTTGC CTTATGAGGC GCTGGACGCT GCACATCAGC CGCTGCCACC ACAGCGCTAC
CGGGCGATGG CCTGCGCACG GCAGCTGTAC TTGTTCTCAA GCCTGATCGG GGTTGTGGAT
AACGCCGAAG TCCGCGCGGC TGCGTTGTTC CGTTCCCTGC AACGGCACTT CCACGATGCC
GAGCACGGCG GCTGGTTCTA CAGCATCGAT CCGCAGGGCA AACCGCTGGA TAAGCGCAAG
GATCTCTACA CCCACGCCTT CATCCTGTTT GCCTGCGCGC ATTACTGGGA AAAGTCCCGC
GAGCCCTTGG TCGAATCGAC CCTGAATGCC GCGCTGGAAG TCATCGGCCG ACGTTTCGCC
ACCGGTGACG GCCTCTACGA AGCCTGCCTC GACCGCGACT GGATCACGCT GGAAACCGGC
CCGCTGCAAA ACCCATTGAT GCACCTGGCC GAAGCGTTCC TGGCCACTCT GGCCGTGCGC
GAAGATGCAC AGGTCAAGCA AGCGCTGAGC GAGTTATGCA CAGCCATGCA CAAGCGTTTC
GTCGATCCTC AGGCCGGTGT GCTGATGGAA AAACCGCTGG GTGCTGTGGA TAACTGGTAT
GAGCCGGGCC ACCAGTTCGA GTGGTATTTC CTGCTGGAAT CCTCGCCCCT GCTGCGCGGC
TCGAAACTGC ATGCCGCGCT GGACCGGGCC TTTGCGTTCA CCGAGCAGTA CGGCGTGGTG
CAGCCGTCCG GCGCGGTGCG GGCCATGCTC GATCTGAATA TGGGCGGGCG TCCGAAGGAT
TCGACCCAAC GCATCTGGGC CCAGGCCGAA TACCTGCGCG CGCTGACGCT GCGTCCGGAC
AGCGAAGCCG CCGTGCTGCG CCAGTTGCAG GCGTTGCAGC AGCGCTTCCT GCATGCCGGT
GGCTGGCATG AATGCCGCGA CGAACAGGGC GAGGTCAGCC GCAAGGACAT GCCGTCGACC
ACGCCGTATC ACTTGGCGAC CTGCTACCGC GGCCTCGCCG ACTATCTGAG CTGA
 
Protein sequence
MPHASRSTSL PELTALFGEV QQHFLDVIVP LWQGPGWNAD MALPYEALDA AHQPLPPQRY 
RAMACARQLY LFSSLIGVVD NAEVRAAALF RSLQRHFHDA EHGGWFYSID PQGKPLDKRK
DLYTHAFILF ACAHYWEKSR EPLVESTLNA ALEVIGRRFA TGDGLYEACL DRDWITLETG
PLQNPLMHLA EAFLATLAVR EDAQVKQALS ELCTAMHKRF VDPQAGVLME KPLGAVDNWY
EPGHQFEWYF LLESSPLLRG SKLHAALDRA FAFTEQYGVV QPSGAVRAML DLNMGGRPKD
STQRIWAQAE YLRALTLRPD SEAAVLRQLQ ALQQRFLHAG GWHECRDEQG EVSRKDMPST
TPYHLATCYR GLADYLS