Gene Pfl01_0558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0558 
Symbol 
ID3712953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp652542 
End bp653447 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content58% 
IMG OID 
Productcation efflux protein 
Protein accessionYP_346291 
Protein GI77456786 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000438262 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.603969 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTAACC GAGGTGAGCA GTCGCTGCTC AAACAATCGA CCATCCTGAT GTTCGCCGTG 
TCGATCGCCG GGATCGCCAC CGGTTTTGTT TCGGGTTCCC AGTCCATCCT GTTCGATGGT
TTTTTTTCGT TGATTGCAAC GTTCATCAAA GTCCTGATGC TGATCACCGC GAAGCTGATC
GCCAAGCAAA GCAACCAGCG TTTCCAGTTC GGTTTCTGGC ATCTGGAGCC GATGGTGCTG
TTGATCGAGG GCAGTTTTCT GTTGCTGATC GCGATCTACG CGTTTCTCAA CGGTGTGTTC
GGCATCATCA ACGGCGGTCG TGAAATCGAG CTGGGGCTGG TGATCATCTA CGCGGCGGTG
TTCACCGTTG TCGAGTTCGC CTACTTCTTC TACGTGCGCC ACCGTAATCG CAAGTTCAAG
TCGAGCCTTA TCCAGTTCGA CAACATCAGC TGGCTTGTAG ACGCGATGCT GTCGGTGGGC
CTGTTGATCA GTTTTCTCGC GGCGCTGCTG CTCAAGTCCC AGGGCTATGG CGAGTGGGCG
AAATTTGTCG ACCCGCTGAT TCTCATCGTG CTGGCCCTGA CCATGCTGCC GCCGGCCTTC
AAGATCCTCG GCCCGGCGCT GCGGGACGTA CTCGGTATTG CGCCGGACAC GCTGGACGAT
CAGGTGCGCC AGGTGATGGA TGCGGCCAAG GTCGAGCATG GTTTCGACGA CTACGTGTCC
TACGTGCAGA AGCACGGGCG GGCGCGGTTC ATCGAAATTC ATGTGGTGTT GCCGGCGAAT
TACCGGCTGC AGAGCGTCGG TCAGCTGGAT GTGCTGCGTG AGGAGATTTC CGCGAAGCTG
GGCAAACCGG ATGCGGCGCG CTGGCTGACC ATCAGCTTCA CCGGCGACAG GAAGTGGATT
GCCTGA
 
Protein sequence
MSNRGEQSLL KQSTILMFAV SIAGIATGFV SGSQSILFDG FFSLIATFIK VLMLITAKLI 
AKQSNQRFQF GFWHLEPMVL LIEGSFLLLI AIYAFLNGVF GIINGGREIE LGLVIIYAAV
FTVVEFAYFF YVRHRNRKFK SSLIQFDNIS WLVDAMLSVG LLISFLAALL LKSQGYGEWA
KFVDPLILIV LALTMLPPAF KILGPALRDV LGIAPDTLDD QVRQVMDAAK VEHGFDDYVS
YVQKHGRARF IEIHVVLPAN YRLQSVGQLD VLREEISAKL GKPDAARWLT ISFTGDRKWI
A