Gene Pfl01_0557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0557 
Symbol 
ID3712952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp651648 
End bp652412 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content64% 
IMG OID 
ProductShort-chain dehydrogenase/reductase SDR 
Protein accessionYP_346290 
Protein GI77456785 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000797066 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.366163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAACA CCCTGTTTAT CACCGGCGCG ACCTCCGGTT TTGGTGAAGC CTGTGCCCGT 
CGTTTTGCCG AGGCCGGCTG GAAACTGGTG CTGACCGGTC GTCGTGAAGA ACGCCTCAAC
GCGCTGTGCG CCGAGCTGTC GAAGCAGACC GAAGTGCATG GTCTGGTGCT GGACGTGCGT
GATCGCAAGG CGATGGAGGA GGCGATTGCC AACCTGCCGC CATCGTTCGC CAAGCTGCGC
GGCCTGATCA ACAACGCCGG CCTGGCGCTG GGCGTGGACC CTGCACCGAA GTGCGACCTC
GATGATTGGG ACACCATGGT CGACACCAAC GTCAAAGGCC TGATGTACAG CACTCGCCTG
TTGCTGCCGC GCCTGATCGC CCACGGTCGC GGCGCCGGTA TCATCAACCT CGGTTCCATC
GCCGGTAATT ACCCGTACCC GGGCAGCCAC GTTTATGGCG CGACCAAGGC GTTCGTCAAA
CAGTTCTCGC TGAACCTGCG CTGCGACCTG CAGGGCACTG GCGTGCGCGT GAGCAACATC
GAGCCGGGCC TGTGCGAGAG CGAGTTCTCG CTGGTGCGTT TCGCCGGCGA TCAGGCGCGT
TACGACGCCA CCTACGCCGG TGCCGAGCCG ATCCAGCCGC AGGACATCGC CGAGACGATC
TTCTGGGTGC TGAACGCGCC GGCGCACATC AACATCAACA GCCTGGAACT GATGCCGGTG
AGCCAGACCT GGGCCGGTTT TGCCATCGAG CGCAACAAGG CTTGA
 
Protein sequence
MSNTLFITGA TSGFGEACAR RFAEAGWKLV LTGRREERLN ALCAELSKQT EVHGLVLDVR 
DRKAMEEAIA NLPPSFAKLR GLINNAGLAL GVDPAPKCDL DDWDTMVDTN VKGLMYSTRL
LLPRLIAHGR GAGIINLGSI AGNYPYPGSH VYGATKAFVK QFSLNLRCDL QGTGVRVSNI
EPGLCESEFS LVRFAGDQAR YDATYAGAEP IQPQDIAETI FWVLNAPAHI NINSLELMPV
SQTWAGFAIE RNKA