Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0556 |
Symbol | |
ID | 3712951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 650192 |
End bp | 650908 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | ABC transporter-like |
Protein accession | YP_346289 |
Protein GI | 77456784 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.000214193 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.647137 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAAC CCATCCTCGA ACTCAAGGAT CTGGACGTGT TCTACGGCCC GATCCAGGCC CTCAAAGGCG TTTCGCTGCA GATCAACGAA GGAGAAACCG TCAGCCTGAT CGGCTCCAAC GGTGCCGGCA AATCCACCCT GTTGATGTCG ATCTTTGGCC AGCCACGGGC GGCGGGCGGG CAGATTCTCT ATCAAGGCGT GGACATTACC CACAAGTCAT CGCACTACAT CGCCTCTAAC GGCATCGCGC AGTCGCCGGA AGGGCGGCGG GTGTTCCCCG ACATGACCGT CGAGGAAAAC CTGCTGATGG GCACCATTCC GATCGGCGAC AAGTACGCCA AGGAAGACAT GCAGCGTATG TTCGAGCTGT TCCCGCGGCT CGAAGAGCGC CGTAATCAGC GGGCCATGAC CATGTCCGGG GGCGAGCAGC AGATGCTCGC GATCGCCCGG GCGCTCATGA GCCGGCCCAA GCTGTTGCTG TTGGACGAGC CGAGCCTCGG TCTGGCGCCG ATCGTGGTGA AACAGATCTT CGCCACCCTG CGGGAACTGG CGAAAACCGG CATGACCATT TTCCTCGTCG AGCAAAACGC CAACCATGCG TTGAAACTGT CCGACCGGGC GTACGTGATG GTCAACGGCG AGATCCGCCT GACGGGCACC GGCCAGGAAC TGCTGGTGAA CGAGGAAGTG CGTAACGCTT ACCTTGGCGG TCATTGA
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Protein sequence | MTQPILELKD LDVFYGPIQA LKGVSLQINE GETVSLIGSN GAGKSTLLMS IFGQPRAAGG QILYQGVDIT HKSSHYIASN GIAQSPEGRR VFPDMTVEEN LLMGTIPIGD KYAKEDMQRM FELFPRLEER RNQRAMTMSG GEQQMLAIAR ALMSRPKLLL LDEPSLGLAP IVVKQIFATL RELAKTGMTI FLVEQNANHA LKLSDRAYVM VNGEIRLTGT GQELLVNEEV RNAYLGGH
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