Gene Pfl01_0556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0556 
Symbol 
ID3712951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp650192 
End bp650908 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content61% 
IMG OID 
ProductABC transporter-like 
Protein accessionYP_346289 
Protein GI77456784 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000214193 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.647137 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAC CCATCCTCGA ACTCAAGGAT CTGGACGTGT TCTACGGCCC GATCCAGGCC 
CTCAAAGGCG TTTCGCTGCA GATCAACGAA GGAGAAACCG TCAGCCTGAT CGGCTCCAAC
GGTGCCGGCA AATCCACCCT GTTGATGTCG ATCTTTGGCC AGCCACGGGC GGCGGGCGGG
CAGATTCTCT ATCAAGGCGT GGACATTACC CACAAGTCAT CGCACTACAT CGCCTCTAAC
GGCATCGCGC AGTCGCCGGA AGGGCGGCGG GTGTTCCCCG ACATGACCGT CGAGGAAAAC
CTGCTGATGG GCACCATTCC GATCGGCGAC AAGTACGCCA AGGAAGACAT GCAGCGTATG
TTCGAGCTGT TCCCGCGGCT CGAAGAGCGC CGTAATCAGC GGGCCATGAC CATGTCCGGG
GGCGAGCAGC AGATGCTCGC GATCGCCCGG GCGCTCATGA GCCGGCCCAA GCTGTTGCTG
TTGGACGAGC CGAGCCTCGG TCTGGCGCCG ATCGTGGTGA AACAGATCTT CGCCACCCTG
CGGGAACTGG CGAAAACCGG CATGACCATT TTCCTCGTCG AGCAAAACGC CAACCATGCG
TTGAAACTGT CCGACCGGGC GTACGTGATG GTCAACGGCG AGATCCGCCT GACGGGCACC
GGCCAGGAAC TGCTGGTGAA CGAGGAAGTG CGTAACGCTT ACCTTGGCGG TCATTGA
 
Protein sequence
MTQPILELKD LDVFYGPIQA LKGVSLQINE GETVSLIGSN GAGKSTLLMS IFGQPRAAGG 
QILYQGVDIT HKSSHYIASN GIAQSPEGRR VFPDMTVEEN LLMGTIPIGD KYAKEDMQRM
FELFPRLEER RNQRAMTMSG GEQQMLAIAR ALMSRPKLLL LDEPSLGLAP IVVKQIFATL
RELAKTGMTI FLVEQNANHA LKLSDRAYVM VNGEIRLTGT GQELLVNEEV RNAYLGGH