Gene Pfl01_0553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0553 
Symbol 
ID3712948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp647107 
End bp648021 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content58% 
IMG OID 
Productinner-membrane translocator 
Protein accessionYP_346286 
Protein GI77456781 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0455233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.45373 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGGTA TTTTCCTGCA GCAACTGGTC AACGGCCTGA CCCTCGGGTC GGTCTATGGC 
CTGATCGCCA TCGGCTACAC AATGGTCTAC GGCATCATCG GCATGATCAA CTTCGCCCAC
GGCGAGGTTT ACATGATTTC TGCTTACCTG GCGGCAATCA GTCTGGCTCT GCTGGCTTAC
TTCGGTATTG AATCCTTCCC GCTGCTGATG CTTGGCACCC TGATATTCAC CATCGTGATC
ACGGCGGTGT ATGGCTGGGT CATCGAGCGA GTCGCTTACA AACCCCTGCG CAACTCCACC
CGACTGGCAC CGTTGATCAG CGCCATCGGC ATCTCCCTGA TTCTGCAAAA CTACGCACAG
ATCGCCCAAG GCGCCAAACA ACAGGGCGTA CCCACGCTGC TGACCGGTGC ATGGCGTGTC
GAAGTCGGTA CCGGCTTCGT GCAACTGACC TACACCAAAG TCTTCATCCT GGTGGCCGCA
TTCGTCGGCA TGGGCCTGCT GACCTACGTC ATCAAGTACA CCAAGCTCGG GCGCATGTGC
CGTGCGACCC AGCAAGACCG CAAAATGGCT TCGATCCTCG GCATCAACAC CGACAGGGTC
ATTTCCTACG TGTTCATCAT CGGTGCGGCC ATGGCGGCGT TGGCCGGCGT GCTGATCACC
ATGAACTACG GCACCTTCGA CTTCTATGCC GGCTTCATCA TCGGCATCAA GGCATTTACT
GCGGCAGTAC TGGGCGGGAT CGGTTCGCTG CCTGGCGCCA TGCTCGGCGG GATCATCCTC
GGGATATCCG AGTCGCTGTT CTCGGGTCTG GTCAACTCCG ACTACAAAGA CGTGTTCAGC
TTCTCGCTGC TCGTACTTGT TCTGGTCTTC CGGCCTCAGG GCCTGCTGGG CCGTCCTCTT
GTGTCGAAGG TGTAA
 
Protein sequence
MDGIFLQQLV NGLTLGSVYG LIAIGYTMVY GIIGMINFAH GEVYMISAYL AAISLALLAY 
FGIESFPLLM LGTLIFTIVI TAVYGWVIER VAYKPLRNST RLAPLISAIG ISLILQNYAQ
IAQGAKQQGV PTLLTGAWRV EVGTGFVQLT YTKVFILVAA FVGMGLLTYV IKYTKLGRMC
RATQQDRKMA SILGINTDRV ISYVFIIGAA MAALAGVLIT MNYGTFDFYA GFIIGIKAFT
AAVLGGIGSL PGAMLGGIIL GISESLFSGL VNSDYKDVFS FSLLVLVLVF RPQGLLGRPL
VSKV