Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0553 |
Symbol | |
ID | 3712948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 647107 |
End bp | 648021 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | inner-membrane translocator |
Protein accession | YP_346286 |
Protein GI | 77456781 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0455233 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.45373 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGGTA TTTTCCTGCA GCAACTGGTC AACGGCCTGA CCCTCGGGTC GGTCTATGGC CTGATCGCCA TCGGCTACAC AATGGTCTAC GGCATCATCG GCATGATCAA CTTCGCCCAC GGCGAGGTTT ACATGATTTC TGCTTACCTG GCGGCAATCA GTCTGGCTCT GCTGGCTTAC TTCGGTATTG AATCCTTCCC GCTGCTGATG CTTGGCACCC TGATATTCAC CATCGTGATC ACGGCGGTGT ATGGCTGGGT CATCGAGCGA GTCGCTTACA AACCCCTGCG CAACTCCACC CGACTGGCAC CGTTGATCAG CGCCATCGGC ATCTCCCTGA TTCTGCAAAA CTACGCACAG ATCGCCCAAG GCGCCAAACA ACAGGGCGTA CCCACGCTGC TGACCGGTGC ATGGCGTGTC GAAGTCGGTA CCGGCTTCGT GCAACTGACC TACACCAAAG TCTTCATCCT GGTGGCCGCA TTCGTCGGCA TGGGCCTGCT GACCTACGTC ATCAAGTACA CCAAGCTCGG GCGCATGTGC CGTGCGACCC AGCAAGACCG CAAAATGGCT TCGATCCTCG GCATCAACAC CGACAGGGTC ATTTCCTACG TGTTCATCAT CGGTGCGGCC ATGGCGGCGT TGGCCGGCGT GCTGATCACC ATGAACTACG GCACCTTCGA CTTCTATGCC GGCTTCATCA TCGGCATCAA GGCATTTACT GCGGCAGTAC TGGGCGGGAT CGGTTCGCTG CCTGGCGCCA TGCTCGGCGG GATCATCCTC GGGATATCCG AGTCGCTGTT CTCGGGTCTG GTCAACTCCG ACTACAAAGA CGTGTTCAGC TTCTCGCTGC TCGTACTTGT TCTGGTCTTC CGGCCTCAGG GCCTGCTGGG CCGTCCTCTT GTGTCGAAGG TGTAA
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Protein sequence | MDGIFLQQLV NGLTLGSVYG LIAIGYTMVY GIIGMINFAH GEVYMISAYL AAISLALLAY FGIESFPLLM LGTLIFTIVI TAVYGWVIER VAYKPLRNST RLAPLISAIG ISLILQNYAQ IAQGAKQQGV PTLLTGAWRV EVGTGFVQLT YTKVFILVAA FVGMGLLTYV IKYTKLGRMC RATQQDRKMA SILGINTDRV ISYVFIIGAA MAALAGVLIT MNYGTFDFYA GFIIGIKAFT AAVLGGIGSL PGAMLGGIIL GISESLFSGL VNSDYKDVFS FSLLVLVLVF RPQGLLGRPL VSKV
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