Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0548 |
Symbol | |
ID | 3712943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 640040 |
End bp | 641263 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | nicotinate phosphoribosyltransferase |
Protein accession | YP_346281 |
Protein GI | 77456776 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.220672 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.267523 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGA GTGTGTTTGC CGATCGCATC GTGCAGAACC TGCTCGACAC CGACTTCTAC AAACTGACGA TGATGCAGGC GGTGCTGCAC AACTACCCCA ACGTCGAAGT CGAATGGGAG TTTCGTTGCC GTAACAGTGA AGATCTGCGC CCGTATCTGG CGGAGATCCG CTTCCAGGTC GAGCGTCTGG CCGAGTTGAG CCTGAGCGCC GATCAGTTGA GTTTCCTGGA GCGCATCAGC TTCCTCAAAC CTGACTTCCT GCGTTTCCTC GGCCTGTTCC GCTTCAACCT GCGCTACCTG CACACCGGTA TCGAGAACGG CGAGTTGTTC ATCCGCCTGC GCGGGCCGTG GCTGCATGTG ATTCTGTTCG AAGTGCCGCT GCTGGCGATC GTCAGCGAAG TGCGCAACCG CTATCGCTAC CGTGAAACGG TGCTGGAACA GGCCCGCGAA CAGCTGTATC GCAAGTTCGA CTGGTTGACC GCCAATGCCT CGGCCGAAGA GTTGTCGCAG TTGCAGGTCG CCGATTTCGG CACACGCCGG CGGTTTTCCT ACCGCGTGCA GGAAGAAGTG GTGAACGTGC TCAAGCACGA TTTCCCCGGA CGCTTCGTCG GCACCAGCAA CGTGCACCTG TCCCGCGAAC TGGACATGAA ACCGCTGGGC ACCATGGCCC ACGAGTGGAT CATGGCCCAC CAGCAACTCG GCCCGCGACT GATCGACAGC CAGATCGCCG CCCTCGATTG CTGGGTTCGC GAGTACCGCG GCCTGCTGGG GATCGCCCTC ACAGACTGCA TCACTACCGA TGCCTTCCTC GGCGATTTCG ATCTGTTCTT CGCCAAGCTG TTCGACGGTC TGCGCCACGA TTCCGGGGAC CCGGTGCTGT GGGGCGAAAA ATGCATCGCC CACTATCACA AGCTCGGCAT CGACCCGATG AGCAAGACCC TGGTGTTCTC CGACAGCCTG ACCCTGCCCA AGTCGCTGGA GATCTTCCGT GCGTTGCGCG GCCGGATCAA TGTCAGCTTC GGCATCGGCA CCAACCTGAC CTGTGACATT CCGGGTGTCG AACCGATGAG CATCGTGCTT AAAATGACCG CCTGCAACGG CCAACCGGTG GCGAAGATCT CCGACGAGCC GGGCAAGACC CACTGCAAAG ACCCGAATTT CGTCGCCTAT TTGCGACACG TTTTCCAGGT TCCTGCCGTT TCCAGCCTTT CCAGCAAGGA GTGA
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Protein sequence | MSESVFADRI VQNLLDTDFY KLTMMQAVLH NYPNVEVEWE FRCRNSEDLR PYLAEIRFQV ERLAELSLSA DQLSFLERIS FLKPDFLRFL GLFRFNLRYL HTGIENGELF IRLRGPWLHV ILFEVPLLAI VSEVRNRYRY RETVLEQARE QLYRKFDWLT ANASAEELSQ LQVADFGTRR RFSYRVQEEV VNVLKHDFPG RFVGTSNVHL SRELDMKPLG TMAHEWIMAH QQLGPRLIDS QIAALDCWVR EYRGLLGIAL TDCITTDAFL GDFDLFFAKL FDGLRHDSGD PVLWGEKCIA HYHKLGIDPM SKTLVFSDSL TLPKSLEIFR ALRGRINVSF GIGTNLTCDI PGVEPMSIVL KMTACNGQPV AKISDEPGKT HCKDPNFVAY LRHVFQVPAV SSLSSKE
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