Gene Pfl01_0548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0548 
Symbol 
ID3712943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp640040 
End bp641263 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content60% 
IMG OID 
Productnicotinate phosphoribosyltransferase 
Protein accessionYP_346281 
Protein GI77456776 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.220672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.267523 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGA GTGTGTTTGC CGATCGCATC GTGCAGAACC TGCTCGACAC CGACTTCTAC 
AAACTGACGA TGATGCAGGC GGTGCTGCAC AACTACCCCA ACGTCGAAGT CGAATGGGAG
TTTCGTTGCC GTAACAGTGA AGATCTGCGC CCGTATCTGG CGGAGATCCG CTTCCAGGTC
GAGCGTCTGG CCGAGTTGAG CCTGAGCGCC GATCAGTTGA GTTTCCTGGA GCGCATCAGC
TTCCTCAAAC CTGACTTCCT GCGTTTCCTC GGCCTGTTCC GCTTCAACCT GCGCTACCTG
CACACCGGTA TCGAGAACGG CGAGTTGTTC ATCCGCCTGC GCGGGCCGTG GCTGCATGTG
ATTCTGTTCG AAGTGCCGCT GCTGGCGATC GTCAGCGAAG TGCGCAACCG CTATCGCTAC
CGTGAAACGG TGCTGGAACA GGCCCGCGAA CAGCTGTATC GCAAGTTCGA CTGGTTGACC
GCCAATGCCT CGGCCGAAGA GTTGTCGCAG TTGCAGGTCG CCGATTTCGG CACACGCCGG
CGGTTTTCCT ACCGCGTGCA GGAAGAAGTG GTGAACGTGC TCAAGCACGA TTTCCCCGGA
CGCTTCGTCG GCACCAGCAA CGTGCACCTG TCCCGCGAAC TGGACATGAA ACCGCTGGGC
ACCATGGCCC ACGAGTGGAT CATGGCCCAC CAGCAACTCG GCCCGCGACT GATCGACAGC
CAGATCGCCG CCCTCGATTG CTGGGTTCGC GAGTACCGCG GCCTGCTGGG GATCGCCCTC
ACAGACTGCA TCACTACCGA TGCCTTCCTC GGCGATTTCG ATCTGTTCTT CGCCAAGCTG
TTCGACGGTC TGCGCCACGA TTCCGGGGAC CCGGTGCTGT GGGGCGAAAA ATGCATCGCC
CACTATCACA AGCTCGGCAT CGACCCGATG AGCAAGACCC TGGTGTTCTC CGACAGCCTG
ACCCTGCCCA AGTCGCTGGA GATCTTCCGT GCGTTGCGCG GCCGGATCAA TGTCAGCTTC
GGCATCGGCA CCAACCTGAC CTGTGACATT CCGGGTGTCG AACCGATGAG CATCGTGCTT
AAAATGACCG CCTGCAACGG CCAACCGGTG GCGAAGATCT CCGACGAGCC GGGCAAGACC
CACTGCAAAG ACCCGAATTT CGTCGCCTAT TTGCGACACG TTTTCCAGGT TCCTGCCGTT
TCCAGCCTTT CCAGCAAGGA GTGA
 
Protein sequence
MSESVFADRI VQNLLDTDFY KLTMMQAVLH NYPNVEVEWE FRCRNSEDLR PYLAEIRFQV 
ERLAELSLSA DQLSFLERIS FLKPDFLRFL GLFRFNLRYL HTGIENGELF IRLRGPWLHV
ILFEVPLLAI VSEVRNRYRY RETVLEQARE QLYRKFDWLT ANASAEELSQ LQVADFGTRR
RFSYRVQEEV VNVLKHDFPG RFVGTSNVHL SRELDMKPLG TMAHEWIMAH QQLGPRLIDS
QIAALDCWVR EYRGLLGIAL TDCITTDAFL GDFDLFFAKL FDGLRHDSGD PVLWGEKCIA
HYHKLGIDPM SKTLVFSDSL TLPKSLEIFR ALRGRINVSF GIGTNLTCDI PGVEPMSIVL
KMTACNGQPV AKISDEPGKT HCKDPNFVAY LRHVFQVPAV SSLSSKE