Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0538 |
Symbol | |
ID | 3713008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 623970 |
End bp | 625367 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | replicative DNA helicase |
Protein accession | YP_346271 |
Protein GI | 77456766 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.294706 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAAA TCTCCGCTCC CGAGCAATAC GATCTGCAAA CCGCCGCGCT GAAGGTGCCG CCGCATTCCA TCGAGGCCGA ACAGGCCGTG CTCGGTGGTC TGATGCTGGA CAACAACGCC TGGGAACGCG TGCTCGATCA AGTCTCCGAC GGCGATTTCT ACCGACATGA CCACCGTCTG ATTTTCCGTG CGATCGCCAA ACTGGCCGAT CAGAACCTGC CGATCGATGT CGTGACCCTT GCCGAGCAAC TGGACAAGGA AGGTCAGACT TCGCAGGTCG GCGGCCTCGG TTACCTGGGT GAGCTGGCGA AAAACACGCC GTCCGTCGCC AACATCAAGG CCTATGCGCA GATCGTCCGC CAGCGCGCGA CGTTGCGTCA GCTGATCGGT ATCAGCACCG AAATTGCCGA CAGCGCCTTC AATCCCGAAG GCCGCACCGC CGAGGAAATC CTCGACGAAG CCGAGCGGCA GATCTTCGCG ATTGCCGAGG CCCGGCCAAA AACCGGCGGC CCGGTGGGTG TGAATGACCT GCTGACCAAG GCCATCGACC GCATCGACAC CCTGTTCAAC ACTGCCGACT CGATCACCGG CCTGTCCACC GGCTACACCG ACCTCGACGA GAAGACCAGC GGCCTGCAAC CGGCCGACCT GATCATCGTC GCCGGCCGTC CGTCGATGGG TAAGACCACC TTCGCGATGA ACCTGGTGGA AAACGCCGTG TTGCGCAGCG ACAAAGTGGT GCTGGTGTAC TCCCTCGAGA TGCCAGGCGA ATCGCTGATC ATGCGTATGC TGTCGTCCCT CGGCCGTATC GACCAGACCA AGGTACGTTC CGGCCAGTTG GAAGACGACG ACTGGCCGCG TCTGACCTCG GCGGTCAATC TGCTCAACGA CCGCAAGCTG TTCATCGATG ACACCGCCGG CATCAGTCCG TCGGAGATGC GTGCCCGGAC CCGGCGGCTG GTGCGCGAGC ACGGCGACAT CGGCCTGATC ATGATCGACT ACCTGCAGCT GATGCAGATC CCGGGTTCCA GCGGCGACAA CCGGACCAAC GAGATTTCCG AGATCTCCCG ATCCCTGAAA GCCCTGGCCA AGGAATTCAA CTGCCCGGTG GTCGCCCTGT CGCAGCTCAA CCGCTCCCTG GAACAGCGTC CCAACAAGCG CCCGGTGAAC TCCGACTTGC GGGAATCCGG AGCGATCGAG CAGGACGCCG ACGTGATCAT GTTCGTGTAC CGGGATGAGG TGTATCACCC GGAAACCGAA CACAAGGGCA TCGCCGAAAT CATCATCGGC AAACAGCGGA ACGGTCCGAT CGGCTTCATT CGCCTGGCTT TCATCGGCAA ATACACACGT TTCGAAAACC TCGCGCCGGG CAGTTACAAC TTCGACGACG ACGAGTAA
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Protein sequence | MNEISAPEQY DLQTAALKVP PHSIEAEQAV LGGLMLDNNA WERVLDQVSD GDFYRHDHRL IFRAIAKLAD QNLPIDVVTL AEQLDKEGQT SQVGGLGYLG ELAKNTPSVA NIKAYAQIVR QRATLRQLIG ISTEIADSAF NPEGRTAEEI LDEAERQIFA IAEARPKTGG PVGVNDLLTK AIDRIDTLFN TADSITGLST GYTDLDEKTS GLQPADLIIV AGRPSMGKTT FAMNLVENAV LRSDKVVLVY SLEMPGESLI MRMLSSLGRI DQTKVRSGQL EDDDWPRLTS AVNLLNDRKL FIDDTAGISP SEMRARTRRL VREHGDIGLI MIDYLQLMQI PGSSGDNRTN EISEISRSLK ALAKEFNCPV VALSQLNRSL EQRPNKRPVN SDLRESGAIE QDADVIMFVY RDEVYHPETE HKGIAEIIIG KQRNGPIGFI RLAFIGKYTR FENLAPGSYN FDDDE
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