Gene Pfl01_0531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0531 
Symbol 
ID3712999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp616285 
End bp617295 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content60% 
IMG OID 
Productextracellular solute-binding protein 
Protein accessionYP_346264 
Protein GI77456759 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.139557 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTTTC GAAATACCCT GCGCCGCGGC TTGACCTTCA CCCTGCTCGG CCTGGCACTC 
GCCCCCCCCC TCACCCAGGC TGCCGACGCG GTTTCCCTGA CGCTCTACAA CGGTCAACAC
AAGGAAGTCG GCGACGCGAT CGCCAAAGCC TTCGAAGCCA AGACCGGCAT TCACGTCAAC
GTGCGCAAGG GCAGCAGCAA TCAGCTGGCC AGCCAGATCA TCGAAGAAGG CGACCGCTCC
CCCGCCGACG TCATCTACAC CGAAGAATCC CCACCGCTGA ACAACCTCGG CGAACAAGGT
CTGCTGGCCA AGGCTGACGA CGCGACCCTG GCCGTTCTGC CGAAAGAATA TGTCGCCGGC
AACGGCACCT GGATCGGAGT GACCGCCCGG GTTCGCGTGG TGGCCTTCAA CCCGAAACTG
ATCGACGAAA AAGATTTGCC GAAATCGGTG CTGGATTTCG CCGATCCGCA GTGGCAAGGC
AAGGTCGGTT TCGTACCGAC CAGCGGCGCG TTCCAGGAAC AAGCCGTGGC GATCATCAAA
AAGCACGGCC GCGAAGCCGC CGAAGAATGG CTGACCGGCC TGCGCGCATT CGGCAAGACC
TACAGCAACA ATATGGTCGC CCTCAAGGCT GTGGAAAACG GCGAAGTCGC CACGGTGCTG
GTAAACAACT ATTACTGGTT CGCCCTGCAG CGAGAGAAAG GCAAGCTTGA TTCCAAACTG
CATTACTTCA CCGGTGGTGA CGTTGGCGGC CTGATCACCG TGTCCAGCGC AGCCGTGCTG
AAATCCAGCA AACATCCAAA AGAAGCCCAG CAATTCCTCG CCTACATGGC CAGCGAAGAA
GGCCAGCGCG TGATCACCCA GACCACCGCC GAGTACCCGC TGCACAAAGG CATGGAATCG
GATCGCGGTC TCAAGCCGTT CAGTGAACTG GAAGCACCGG ACGTCACGCC GGCCGACCTG
GGCAACGCCG AAGAAGCGCT GGAGCTGGAA CGCGAAGTTG GCCTGAACTG A
 
Protein sequence
MMFRNTLRRG LTFTLLGLAL APPLTQAADA VSLTLYNGQH KEVGDAIAKA FEAKTGIHVN 
VRKGSSNQLA SQIIEEGDRS PADVIYTEES PPLNNLGEQG LLAKADDATL AVLPKEYVAG
NGTWIGVTAR VRVVAFNPKL IDEKDLPKSV LDFADPQWQG KVGFVPTSGA FQEQAVAIIK
KHGREAAEEW LTGLRAFGKT YSNNMVALKA VENGEVATVL VNNYYWFALQ REKGKLDSKL
HYFTGGDVGG LITVSSAAVL KSSKHPKEAQ QFLAYMASEE GQRVITQTTA EYPLHKGMES
DRGLKPFSEL EAPDVTPADL GNAEEALELE REVGLN