Gene Pfl01_0524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0524 
Symbol 
ID3713165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp606322 
End bp607623 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content60% 
IMG OID 
ProductGTP-binding protein, HSR1-like 
Protein accessionYP_346257 
Protein GI77456752 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0227372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.479047 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTCTTTG AGCGCCACGG TGGTGGTGAA CGAGTCATCC TCGTTCACTT GGATGGACAG 
GACCCTGAGG CGCGCGAAGA TCCGCAGGAG TTTCAGGAAC TGGCAAATTC GGCTGGCGCC
GAGACCGTTG CGTTTTTTAA CGTGCCGCGT CATCGGCCAA CCGCCAAATA CCTGATTGGC
AGCGGCAAGG TCGAGGAACT GCGCGACCTG GTCCACGCCG AAGAAGCCGA TCTGGTGATC
TTCAATCACA CCCTTACACC CAGTCAGGAA CGTAACCTCG AACGTGTTTT CGAGTGTCGC
GTGATCGACC GTACCGGTCT GATTCTCGAT ATTTTCGCCC AACGCGCCCG TACCCATGAG
GGCAAGCTCC AGGTCGAACT GGCCCAGCTT GACCACATGA GCACCCGGCT GGTTCGCGGC
TGGACTCACC TTGAGCGTCA GGGTGGCGGT ATCGGCATGC GCGGCCCGGG TGAAACCCAG
CTCGAAACCG ACCGGCGACT GCTGCGGGTT CGCCTGCGCC AGATCAAGCG GCGGCTGGAA
AAAGTGCGCA GCCAGCGCGA ACAGTCGCGT CGCGGCCGCT CGCGTGCGGA TATCCCTACC
GTTTCTCTGG TGGGATACAC CAACGCCGGT AAATCCACGC TGTTCAATAA TGTGACGAAG
TCCGAGGTGT ACGCGGCTGA CCAGCTGTTC GCCACGCTCG ACCCGACCCT GCGCCGTCTG
GATCTGGACG ACCTGGGGCC GATTGTCCTG GCCGACACCG TGGGCTTCAT CCGCCACTTG
CCGCACAAAC TGGTCGAGGC ATTTCGGTCT ACGCTCGAAG AGTCGAGCAA CTCCGACCTG
CTGTTGCACG TGATCGATGC GGCCGAACCG GATCGCATGT TGCAGATCGA GCAGGTGATG
GTGGTGCTGG GCGAGATCGG TGCCCAGGAC TTGCCGATCC TCGAGGTCTA TAACAAACTC
GATTTGCTTG AAGGCGTTGA GCCACAAATC CAGCGCGATG AAAACGGCAA GCCCCAGCGG
GTCTGGCTGT CGGCGCGTGA TGGCACCGGT CTGGAATTGC TCGAGCAGGC GATTGCCGAG
TTGTTGGGCA GCGACCTGTT CGTGGGGACC TTGCGCTTGC CTCAACGGTT CGCGCGTCTG
CGTGCGCAGT TCTTCGAACT GGGCGCGGTA CAGAAAGAAG AACACGATGA AGAAGGGGTC
AGCTTGCTGG CCGTTCGATT GCCACGCTCG GAGCTCAATC GACTGGTGAG TCGTGAAGGC
GTTGTGCCGA CGGAGTTCAT CGAGCAACAC ACTTTGCAAT AA
 
Protein sequence
MFFERHGGGE RVILVHLDGQ DPEAREDPQE FQELANSAGA ETVAFFNVPR HRPTAKYLIG 
SGKVEELRDL VHAEEADLVI FNHTLTPSQE RNLERVFECR VIDRTGLILD IFAQRARTHE
GKLQVELAQL DHMSTRLVRG WTHLERQGGG IGMRGPGETQ LETDRRLLRV RLRQIKRRLE
KVRSQREQSR RGRSRADIPT VSLVGYTNAG KSTLFNNVTK SEVYAADQLF ATLDPTLRRL
DLDDLGPIVL ADTVGFIRHL PHKLVEAFRS TLEESSNSDL LLHVIDAAEP DRMLQIEQVM
VVLGEIGAQD LPILEVYNKL DLLEGVEPQI QRDENGKPQR VWLSARDGTG LELLEQAIAE
LLGSDLFVGT LRLPQRFARL RAQFFELGAV QKEEHDEEGV SLLAVRLPRS ELNRLVSREG
VVPTEFIEQH TLQ