Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0518 |
Symbol | |
ID | 3713159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 599686 |
End bp | 601185 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_346251 |
Protein GI | 77456746 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.125953 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.1584 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGCACA CTAAAGATCA ATTACCCGAC GCACTGTACC GTGCCGCGCA GGTGCGCGAA CTCGATGCAC GGCTGATCGC CGGGGGCACG CCGGGCTTCG AATTGATGCA GCGTGCCGCC CATGCCACAT GGCGCGCGCT GGTGCGCCAA TGGCCGGCCG CGAATGAAAT GACGGTGTTC GCAGGGCACG GCAACAACGC CGGCGATGGT TATCTGGTGG CGGCGCTGGC CCACCGGGCG GGTTGGCAGG TTCAGGTGCT GGCTGTCGGT GAGCCGCAGC GTTTAAAGGG CGATGCTGCC GTGGCGCACG CCGAAGCCGT GGCCGAGGGT GTCTCGATTG CAGCATGGGA TCTGTCCTGC GAGTTGCGCG GCATCGTCGT TGACGCGTTG CTCGGCACCG GCCTGAACGG CGAAGTGCGT GAGCCTTACG CCGCTGCGAT TGCGGCGATC AATGCCAGCG GACTGCCGGT GGTGGCGGTC GATATTCCTT CCGGGTTGTG CGCCGATACC GGTCATGCGC TGGGTGATGC AGTGCACGCC GACCTCACCG TGACTTTTAT CGGGCTGAAA CTCGGGCTGT TCACGGGTGC GGCGGCGGAT CACGTCGGCG AACTGCGGTT TAACGATCTG CAGGCCACGG CCGAAAACTT CAGTGACATT CCTGCTGCCG CTCAACGGCT CAGCGCGATT AACCTGCCGC GTCTGGCGGC CCGCGCGCCG GCGGCGCACA AGGGGCGTTT CGGCCATGTG CTGCTGATCG GCGGCGATCA CGGTTTTGGC GGGGCGATTC TGCTGAGCAC CGAAAGCGCG TTGCGCAGTG GTGCCGGGAT GGTCTCGGTC GCGACTCGCC CGGAACATGT GCCAGCGGCG TTGAGCCGGG TGCCGGAAGC CATGGTGCTG GGTACTTCTT CGGCCAATCA GTTGATGGGG CTGCTGGAAA AGGTGTCGGT GCTGGTGGTC GGGCCGGGAC TGGGGCAGGC CGCTTGGGGA AGGGCGCTGT TGTCGGCCGC TGCCAATGCC TCGCTGCCGC AGGTGTGGGA TGCCGATGCG CTGAACCTGC TGGCCCGCGG TTTTGTCAGT TTGCCCAAGG ATTGCGTGAT CACGCCGCAT CCGGGGGAAG CAGCGCGTTT ATTGGGGATC AGTACCGCCG AAGTGCAGGC TGATCGTCCC GCGGCGGCGC TGGCGTTGAG CAAAAAATAT ACAGCGGTGG TGGTGCTCAA GGGCGCGGGC AGTCTGATTG CTCATCCCGA TGGTCGTCTG GCGCTTTGTC ATCAAGGCCA TCCGGCCATG GCCACTGCCG GGCTCGGCGA TGTGCTGGCG GGCCTGATCG GCGCGCTGCT GGCCCAGGGC ATGGACGGTT TCGATGCCGC GTGTCTGGCG GTCTGGCTGC ACGCCAGCGC CGGGGCGCAA CAAGGTAAAT TCGGCCGTGG GCTGGCGGCC AGTGATCTGA TTCCAGCCAT TCGTCAGTTG TTGGAGGAGC ATGCACCGTG TCTGAAGTAA
|
Protein sequence | MPHTKDQLPD ALYRAAQVRE LDARLIAGGT PGFELMQRAA HATWRALVRQ WPAANEMTVF AGHGNNAGDG YLVAALAHRA GWQVQVLAVG EPQRLKGDAA VAHAEAVAEG VSIAAWDLSC ELRGIVVDAL LGTGLNGEVR EPYAAAIAAI NASGLPVVAV DIPSGLCADT GHALGDAVHA DLTVTFIGLK LGLFTGAAAD HVGELRFNDL QATAENFSDI PAAAQRLSAI NLPRLAARAP AAHKGRFGHV LLIGGDHGFG GAILLSTESA LRSGAGMVSV ATRPEHVPAA LSRVPEAMVL GTSSANQLMG LLEKVSVLVV GPGLGQAAWG RALLSAAANA SLPQVWDADA LNLLARGFVS LPKDCVITPH PGEAARLLGI STAEVQADRP AAALALSKKY TAVVVLKGAG SLIAHPDGRL ALCHQGHPAM ATAGLGDVLA GLIGALLAQG MDGFDAACLA VWLHASAGAQ QGKFGRGLAA SDLIPAIRQL LEEHAPCLK
|
| |