Gene Pfl01_0518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0518 
Symbol 
ID3713159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp599686 
End bp601185 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_346251 
Protein GI77456746 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.125953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.1584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCACA CTAAAGATCA ATTACCCGAC GCACTGTACC GTGCCGCGCA GGTGCGCGAA 
CTCGATGCAC GGCTGATCGC CGGGGGCACG CCGGGCTTCG AATTGATGCA GCGTGCCGCC
CATGCCACAT GGCGCGCGCT GGTGCGCCAA TGGCCGGCCG CGAATGAAAT GACGGTGTTC
GCAGGGCACG GCAACAACGC CGGCGATGGT TATCTGGTGG CGGCGCTGGC CCACCGGGCG
GGTTGGCAGG TTCAGGTGCT GGCTGTCGGT GAGCCGCAGC GTTTAAAGGG CGATGCTGCC
GTGGCGCACG CCGAAGCCGT GGCCGAGGGT GTCTCGATTG CAGCATGGGA TCTGTCCTGC
GAGTTGCGCG GCATCGTCGT TGACGCGTTG CTCGGCACCG GCCTGAACGG CGAAGTGCGT
GAGCCTTACG CCGCTGCGAT TGCGGCGATC AATGCCAGCG GACTGCCGGT GGTGGCGGTC
GATATTCCTT CCGGGTTGTG CGCCGATACC GGTCATGCGC TGGGTGATGC AGTGCACGCC
GACCTCACCG TGACTTTTAT CGGGCTGAAA CTCGGGCTGT TCACGGGTGC GGCGGCGGAT
CACGTCGGCG AACTGCGGTT TAACGATCTG CAGGCCACGG CCGAAAACTT CAGTGACATT
CCTGCTGCCG CTCAACGGCT CAGCGCGATT AACCTGCCGC GTCTGGCGGC CCGCGCGCCG
GCGGCGCACA AGGGGCGTTT CGGCCATGTG CTGCTGATCG GCGGCGATCA CGGTTTTGGC
GGGGCGATTC TGCTGAGCAC CGAAAGCGCG TTGCGCAGTG GTGCCGGGAT GGTCTCGGTC
GCGACTCGCC CGGAACATGT GCCAGCGGCG TTGAGCCGGG TGCCGGAAGC CATGGTGCTG
GGTACTTCTT CGGCCAATCA GTTGATGGGG CTGCTGGAAA AGGTGTCGGT GCTGGTGGTC
GGGCCGGGAC TGGGGCAGGC CGCTTGGGGA AGGGCGCTGT TGTCGGCCGC TGCCAATGCC
TCGCTGCCGC AGGTGTGGGA TGCCGATGCG CTGAACCTGC TGGCCCGCGG TTTTGTCAGT
TTGCCCAAGG ATTGCGTGAT CACGCCGCAT CCGGGGGAAG CAGCGCGTTT ATTGGGGATC
AGTACCGCCG AAGTGCAGGC TGATCGTCCC GCGGCGGCGC TGGCGTTGAG CAAAAAATAT
ACAGCGGTGG TGGTGCTCAA GGGCGCGGGC AGTCTGATTG CTCATCCCGA TGGTCGTCTG
GCGCTTTGTC ATCAAGGCCA TCCGGCCATG GCCACTGCCG GGCTCGGCGA TGTGCTGGCG
GGCCTGATCG GCGCGCTGCT GGCCCAGGGC ATGGACGGTT TCGATGCCGC GTGTCTGGCG
GTCTGGCTGC ACGCCAGCGC CGGGGCGCAA CAAGGTAAAT TCGGCCGTGG GCTGGCGGCC
AGTGATCTGA TTCCAGCCAT TCGTCAGTTG TTGGAGGAGC ATGCACCGTG TCTGAAGTAA
 
Protein sequence
MPHTKDQLPD ALYRAAQVRE LDARLIAGGT PGFELMQRAA HATWRALVRQ WPAANEMTVF 
AGHGNNAGDG YLVAALAHRA GWQVQVLAVG EPQRLKGDAA VAHAEAVAEG VSIAAWDLSC
ELRGIVVDAL LGTGLNGEVR EPYAAAIAAI NASGLPVVAV DIPSGLCADT GHALGDAVHA
DLTVTFIGLK LGLFTGAAAD HVGELRFNDL QATAENFSDI PAAAQRLSAI NLPRLAARAP
AAHKGRFGHV LLIGGDHGFG GAILLSTESA LRSGAGMVSV ATRPEHVPAA LSRVPEAMVL
GTSSANQLMG LLEKVSVLVV GPGLGQAAWG RALLSAAANA SLPQVWDADA LNLLARGFVS
LPKDCVITPH PGEAARLLGI STAEVQADRP AAALALSKKY TAVVVLKGAG SLIAHPDGRL
ALCHQGHPAM ATAGLGDVLA GLIGALLAQG MDGFDAACLA VWLHASAGAQ QGKFGRGLAA
SDLIPAIRQL LEEHAPCLK