Gene Pfl01_0504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0504 
Symbol 
ID3713067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp584335 
End bp585048 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content63% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_346237 
Protein GI77456732 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0320775 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACTT CTCTGCGCCC CCTTATTTTC CTGCTCGCCG GCGTTCTTGG CCTGGCGGGT 
TGCAGTGTTC ACCAGCCGGT GTCGCTGTAT CAGCTGGACA GCGGAAGTCC GGCTCAGCCT
GCGCAAAGCG CGGGCATGGC AGTTTTGCTG GGCCCTGTAA TCGTTGCCGA TTACCTGCAA
CGTGAAACCC TGTTGCAGCG TCAGCCGGAC GGCAGCCTGC AGGCCTCGGT CGATGGCCGC
TGGGCCGGCA GCCTGTCTTC GGACATCGAT CAGTTGCTTC TGCGTCAGGT TGCCGGGCAT
CTGGACAGTC AACGCGTAGT GCTGGCGCCA GCGACCCTGG GCTTCACCCC GGATGTGCAG
GTGCTGTTGA CCATCACTCG TCTGGATTCC GGTGCCAAGC AACCGGCGAT TCTGGACGCG
CAGTGGCGCC TGATCGACCG TCGTGGTCAG GTGCGGGACA ACCGCATCGT GCATCTGCAG
GAACAGCATG CCGGCACCAC CGCCGCGCAG GTGCAGGCGC AGGGCGTGTT GTTGCAGCGT
CTGGCCGAGC AGCTGTCGGT GGCGCTCAAG CCGTTGGCCA ATCAGCCACC GGTTGCCGAA
GCACCGCGCA AACCGGCACC GAAGCCGGCA GCACCGGCGG CGGAAGCCGA GAAACAGCCG
AAGATCCCGA TGGCTTCACC TATTCGTACG GATATGGAAG TGTTTCGCTT CTAA
 
Protein sequence
MMTSLRPLIF LLAGVLGLAG CSVHQPVSLY QLDSGSPAQP AQSAGMAVLL GPVIVADYLQ 
RETLLQRQPD GSLQASVDGR WAGSLSSDID QLLLRQVAGH LDSQRVVLAP ATLGFTPDVQ
VLLTITRLDS GAKQPAILDA QWRLIDRRGQ VRDNRIVHLQ EQHAGTTAAQ VQAQGVLLQR
LAEQLSVALK PLANQPPVAE APRKPAPKPA APAAEAEKQP KIPMASPIRT DMEVFRF