Gene Pfl01_0499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0499 
Symbol 
ID3713062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp577085 
End bp578992 
Gene Length1908 bp 
Protein Length635 aa 
Translation table11 
GC content63% 
IMG OID 
ProductDNA topoisomerase IV subunit B 
Protein accessionYP_346232 
Protein GI77456727 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACTC CCAGCGCTAG CTCCTATAAC GCCGACGCCA TCGAAGTCCT CTCGGGCCTC 
GACCCGGTGC GCAAACGCCC CGGCATGTAC ACCGACACCA GTCGGCCGAA CCACCTTGCC
CAGGAAGTCA TCGACAACAG TGTCGACGAA GCCCTGGCCG GCCACGCCAA ATCGATTCAG
GTCATCCTCC ACGCCGACCA CTCGCTGGAA GTCTGCGACG ACGGCCGTGG CATGCCGGTC
GACATCCACC CGGAAGAGGG GGTGTCTGGC GTTGAACTGA TCCTCACCAA GCTCCATGCG
GGCGGCAAGT TTTCCAACAA GAACTACCAG TTCTCCGGCG GTCTGCACGG GGTGGGTATT
TCCGTGGTCA ACGCCTTGTC GACCCAGGTA CGGGTGCGGG TCAAGCGTGA CGGCAACGAA
TACGAAATGA CCTTCGCCGA CGGCTTCAAG GCCACCGATC TGCAAGTGAT CGGCACCGTC
GGCAAGCGCA ATACCGGGAC CAGCGTGTAC TTCGCGCCGG ACCCGAAATA CTTTGACTCA
CCAAAATTCT CCATCAGCCG CCTCAAGCAT GTGCTCAAGG CCAAGGCCGT TCTGTGCCCG
GGGCTGCTGA TCAGCTTCGA AGACAAAGGC ACCGGCGAAA AGGTCGAGTG GCATTACGAG
GATGGCTTGC GCTCCTATCT GGTGGACGCG GTCAGCGAAT TCGAGCGTCT GCCGGATGCC
CCGTTCTGCG GCAACCTGGC CGGCACCAAG GAAGCGGTCG AGTGGGCGCT GCTGTGGCTG
CCGGAAGGCG GCACCTCGGT CACTGAAAGC TACGTCAACC TGATCCCGAC GGAGCAGGGC
GGCACCCACG TCAACGGTCT GCGTCAGGGC CTGCTCGATG CGATGCGCGA ATTCTGCGAG
TTCCGCAGCC TGCTGCCGCG CGGCGTGAAG CTGGCGCCGG AAGACGTCTG GGAGCGCATT
GCTTTCGTCC TGTCGATGAA GATGCAGGAA CCGCAATTCT CCGGCCAGAC CAAAGAGCGC
CTGTCATCCC GTGAAGCGGC GGCTTTCGTT TCCGGTGTGG TCAAGGACGC GTTCAGCCTG
TGGCTCAACG CCAACCCGGA AACCGGTCTG GCCCTGGCAG AGCTGGCGAT CAGCAACGCC
GGCCGTCGTC TGAAGGCCAG CAAAAAAGTC GAGCGCAAAC GCATCACCCA GGGACCGGCA
TTGCCGGGCA AACTGGCCGA CTGTGCCGGG CAGGACCCGA TGCGTTCCGA GCTGTTCCTG
GTGGAAGGTG ATTCCGCCGG CGGTTCGGCC AAACAGGCGC GGGACAAGGA GTTCCAGGCG
ATCCTGCCGT TGCGCGGCAA GATCCTCAAC ACCTGGGAAG TCGACGGCAG CGAAGTGCTG
GCCAGCCAGG AAGTGCACAA CATCGCGGTG GCCATCGGGG TCGATCCGGG CGCCGAGGAC
ATGAGCCAGC TGCGCTACGG CAAGATTTGC ATCCTCGCCG ACGCCGACTC CGACGGCCTG
CACATCGCGA CCCTGCTCTG TGCCTTGTTC GTCCAGCATT TCCGCCCGCT GGTGGATGCC
GGTCACGTCT ATGTCGCGAT GCCGCCGTTG TACCGCATCG ACCTGGGCAA AGAGATCTAC
TACGCCCTCG ACGAAGCCGA GCGCGACGGG ATCCTCGACC GTCTGGTCGC CGAGAAGAAA
CGCGGCAAGC CGCAGGTCAC CCGATTCAAA GGCCTGGGTG AAATGAACCC GCCGCAACTG
CGCGAAACCA CCATGGACCC GAACACCCGG CGCCTGGTGC AGTTGACCCT CGGGGGCGAC
TTCGCCGAGA CCTCGGAAAT GATGGACATG CTGCTGGCGA AAAAACGCGC CGGCGACCGC
AAGACCTGGC TCGAATCCAA GGGTAACCTC GCCGAGGTTC TGGCCTGA
 
Protein sequence
MATPSASSYN ADAIEVLSGL DPVRKRPGMY TDTSRPNHLA QEVIDNSVDE ALAGHAKSIQ 
VILHADHSLE VCDDGRGMPV DIHPEEGVSG VELILTKLHA GGKFSNKNYQ FSGGLHGVGI
SVVNALSTQV RVRVKRDGNE YEMTFADGFK ATDLQVIGTV GKRNTGTSVY FAPDPKYFDS
PKFSISRLKH VLKAKAVLCP GLLISFEDKG TGEKVEWHYE DGLRSYLVDA VSEFERLPDA
PFCGNLAGTK EAVEWALLWL PEGGTSVTES YVNLIPTEQG GTHVNGLRQG LLDAMREFCE
FRSLLPRGVK LAPEDVWERI AFVLSMKMQE PQFSGQTKER LSSREAAAFV SGVVKDAFSL
WLNANPETGL ALAELAISNA GRRLKASKKV ERKRITQGPA LPGKLADCAG QDPMRSELFL
VEGDSAGGSA KQARDKEFQA ILPLRGKILN TWEVDGSEVL ASQEVHNIAV AIGVDPGAED
MSQLRYGKIC ILADADSDGL HIATLLCALF VQHFRPLVDA GHVYVAMPPL YRIDLGKEIY
YALDEAERDG ILDRLVAEKK RGKPQVTRFK GLGEMNPPQL RETTMDPNTR RLVQLTLGGD
FAETSEMMDM LLAKKRAGDR KTWLESKGNL AEVLA