Gene Pfl01_0493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0493 
Symbol 
ID3713056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp572127 
End bp573419 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content64% 
IMG OID 
Productpermease for cytosine/purines, uracil, thiamine, allantoin 
Protein accessionYP_346226 
Protein GI77456721 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.113424 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCACTC AACCCGGTAC TTATTCCCCC GACCTCGCCG TGCCCGCCAA CCAGCGTGTA 
TTCGGCGGTC GCGATCTGTT TTCCCTGTGG TTTTCCCTCG GCATCGGCCT GATGGTCTTG
CAGACCGGTG CATTGCTGGC GCCGGGGCTG GGCCTGTCGG GATCGCTGCT GGCGATTTTC
CTCGGCACCC TGGTCGGCGT CCTGTTGCTG GCCGCCGTTG GCGTGATCGG CAGCGACACC
GGCCTGTCGT CGATGGCCGC GCTGAAACTC AGCCTCGGCA GCAAAGGTGC GAGCCTGCCG
GCGCTGCTCA ACCTGCTGCA ACTGATCGGA TGGGGCTCGT TCGAAATTAT CGTCATGCGC
GACGCCGCCA GTCTGCTCGG CACCCGTGCG TTCAGCGAAG GTTCGCTGTG GGCCAGTCCG
ATGTTGTGGA CGCTGTGCTT CGGCGCATTG GCGACGTTGC TCGCGATCAG CGGGCCGTTG
ACGTTCGTGC GCAAGATCCT GCGCAAGTGG GGCATCTGGC TGATTCTGGC CGCGTGCATC
TGGCTGACCT GGAACCTGTT CGCCAAGGCT GATCTCGCCG CCTTGTGGGC ACAGGCCGGG
GATGGCTCGA TGTCACTCGC CGTGGGCTTC GACATTGCGA TTGCGATGCC GCTGTCGTGG
CTGCCGCTGA TCGCCGACTA CTCGCGTTTC GGCCAGCGGG CGAAGAACGT GTTCGGCGGC
ACGGCCATCG GGTTTTTCAT CGGCAACTTC TGGCTGATGA GTCTCGGCGT GGCCTACACC
CTGGCCTTCG CGCCGAGCGG TGAAGTCAAC GCGCTGCTGC TGGCACTGGC CGGTGCGGGT
CTGGGTATTC CGCTGCTGCT GATTCTGCTG GACGAGTCGG AGAACGCTTT CGCCGACATT
CATTCGGCAG CGGTTTCCAG CGGGATTCTG TTGCGTCTGA AAGTCGAGCA TCTGGCGCTG
GCCATCGGTG TGATCTGCAC CCTGATCGCC TTGCTCGCGC CATTGGCGCA ATACCAGAAC
TTCCTGCTGC TGATCGGTTC GGTGTTTGCA CCGCTGTTCG GCGTGGTGCT GGTGGATCAC
TTCATCCTGC GCAAACGCAG TGCCCAAGTG GCGTCGGCCG CGTTGCGCTG GCCGGCACTA
TTGGCCTGGC TGGGTGGCAT CAGCACCTAT CACTTGCTGG CCAATCTGTA TCCGGATGTC
GGCGCGACCC TGCCGGCGCT GGTGCTGGCA GGGCTGCTGC AACTGGTGCT CGGCCGGGCT
TTCAGTTACG GCCGGGAAAC AGCTCGGGCT TGA
 
Protein sequence
MSTQPGTYSP DLAVPANQRV FGGRDLFSLW FSLGIGLMVL QTGALLAPGL GLSGSLLAIF 
LGTLVGVLLL AAVGVIGSDT GLSSMAALKL SLGSKGASLP ALLNLLQLIG WGSFEIIVMR
DAASLLGTRA FSEGSLWASP MLWTLCFGAL ATLLAISGPL TFVRKILRKW GIWLILAACI
WLTWNLFAKA DLAALWAQAG DGSMSLAVGF DIAIAMPLSW LPLIADYSRF GQRAKNVFGG
TAIGFFIGNF WLMSLGVAYT LAFAPSGEVN ALLLALAGAG LGIPLLLILL DESENAFADI
HSAAVSSGIL LRLKVEHLAL AIGVICTLIA LLAPLAQYQN FLLLIGSVFA PLFGVVLVDH
FILRKRSAQV ASAALRWPAL LAWLGGISTY HLLANLYPDV GATLPALVLA GLLQLVLGRA
FSYGRETARA