| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0491 |
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| Symbol | |
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| ID | 3713054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 568234 |
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| End bp | 569667 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | Type I secretion outer membrane protein, TolC |
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| Protein accession | YP_346224 |
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| Protein GI | 77456719 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00611692 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGCA AACTCTCACT GGCTGTTGCC GTGTCTTGTG CGTCCACCAC AACGGTCTGG
GCAGCAGAAG CGCCTTTATC GACCAAGACT GATCTGGTCA GCGTCTATCA GGAAGCGGTC
GACAACAACG CCGACCTGGC CGCCGCCCGC GCCCAGTACG GTGCGCAGAA AGAAGTCGTG
CCCCAGGCCC GCGCCGGGTT GCTGCCGAAC CTGTCCGGCG GCGCTGAAGT CGCCAACGTA
CGCACGTCGA TCGACCAGCC CTCGGCCATC GCCAACCGCA GCGCGCACTC CTATCAGGCG
ACCCTGGCGC AGCCGCTGTT CCGCGCCGAC CGCTGGTTCC AGTACCAGGC CGCCAAGGAC
GTCAACGAGC AGGCCGCGCT GCAACTCTCG GCCACCGAGC AGAACCTGAT CCTGCAAACC
GCCGAAAGCT ATTTCAACGT GCTGCGCAGC CAGGACAACC TGGCCTCGAC CAAAGCCGAG
GAAGCCGCGT TCAAGCGCCA GCTCGATCAG TCCAACGAGC GCTTCGATGT GGGCCTGTCG
GACAAGACCG ACGTGCTGCA ATCGCAAGCC AGTTACGACA CCGCACGCGC CAACCGGATC
GTCGCCCAGC GTCAGGTCGA TGATGCGTTC GAAGCGCTGA TCACCCTGAC CAACCGCCAG
TACAACTCGA TCCAGGGCAT CGTCCACACC CTGCCGATCC TGCCGCCGGC ACCGAACGAC
GCCAAGGCCT GGGTCGATAC CGCCGCGAAA CAGAACCTCA ATCTGCTGGC CAGCAACTAT
GCGGTCAGCT CCGCCGAACA GACCCTGAAA CAGCGCAAGG CCGGCCACCT GCCGACCCTC
GACGCCGTGG CCAAATACGA AAAGGGCGAC AACGACGCCC TGGGTTTCTC CAACCCGAAT
GCGTTCGGTA CGCCGTACAG TGGCAATGTC GAGCAGAGCA CCGTGGGCCT GCAACTGAAC
ATTCCGATCT ACAGTGGCGG ATTGACCAGC TCCCAGGTGC GCGAGTCCTA CTCACGGCTG
GACCAGACCG AACAGCAGCG TGAAGGCCTG CGTCGGCAAG TGGTCGAGAA CACCCGCAAC
CTGCACCGCG CGGTGAACAC CGACGTCGAG CAGGTGCAGG CGCGCCGCCA GTCGATCATC
TCCAACCAGA GTGCGGTGGA AGCCACGGAA ATCGGTTATC AGGTGGGGAC GCGCAACATC
GTCGACGTGC TCGACGCCCA GCGTCAGCTG TACACCTCGG TGCGCAACTA CAACAACACC
CGCTACGACT ACATCCTCGA CAATCTGCGC TTGAAGCAGG CGGCGGGGAC GTTGAACCCG
GGCGACTTGC AGGATCTGAC CCGCTACCTG AAGGCCGACT ACAACCCGGA CAAGGATTTC
CTGCCGCCGG ATCTGGCCAA GGCTGCCGAA GCCCAGCTCA AGGCCCGGCC TTAA
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| Protein sequence | MLRKLSLAVA VSCASTTTVW AAEAPLSTKT DLVSVYQEAV DNNADLAAAR AQYGAQKEVV
PQARAGLLPN LSGGAEVANV RTSIDQPSAI ANRSAHSYQA TLAQPLFRAD RWFQYQAAKD
VNEQAALQLS ATEQNLILQT AESYFNVLRS QDNLASTKAE EAAFKRQLDQ SNERFDVGLS
DKTDVLQSQA SYDTARANRI VAQRQVDDAF EALITLTNRQ YNSIQGIVHT LPILPPAPND
AKAWVDTAAK QNLNLLASNY AVSSAEQTLK QRKAGHLPTL DAVAKYEKGD NDALGFSNPN
AFGTPYSGNV EQSTVGLQLN IPIYSGGLTS SQVRESYSRL DQTEQQREGL RRQVVENTRN
LHRAVNTDVE QVQARRQSII SNQSAVEATE IGYQVGTRNI VDVLDAQRQL YTSVRNYNNT
RYDYILDNLR LKQAAGTLNP GDLQDLTRYL KADYNPDKDF LPPDLAKAAE AQLKARP
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