| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0480 |
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| Symbol | |
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| ID | 3713237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 555573 |
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| End bp | 557435 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | |
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| Product | O-antigen polymerase |
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| Protein accession | YP_346213 |
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| Protein GI | 77456708 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.450132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTCA GCGGCTTCAG CAGTACGTCC AGTCGAATTT TCGATTTCAT CAGCCTGTGG
ATTCTTCCCG TCGGCTACTT CCTGCTCTTG TGCGCGCTGT TCTTCCTGCC GGGCCGCAGC
CTTCATCACA AGCTGTTTTA CGGCCTGTTC AGCATTCCGA CGCTGATCGC CCTGTGCCTG
CGCCCGCGTG AACTCAAGGA AATGCTGCGT GAACCGGTGT TCATCGCACT GCTGCTGTTT
GCCGGCTGGG CGTTACTCAG TCTTTGCTGG GGTCCGCAGG ATGAACCGAT AGGCGGCATG
TTCAAACCTC CGTTGCATAC CCTGATGCTG TTCGCCGGGT GTTTTCTGCT GGTCCGCTAC
CGCAGCGACA TCCTGACCCC GTTGCTGTTC GCCGCCGCAC TGGTGGCCCT GATCGCAACG
ATCGCCTTCC TGATTCCGTT CATGCTCCAC TTCGAACCCG GCGCGCGCCT GATCGGCGGC
GGCGCGTTCG ACAACCCGCT GCTCAGCTCC CATCTGTTCG GATTTTTCTG CGCCTACTGG
CTCAGTCTGA GCATGACCTG CAAGAATCGC CGGCTGTACT GGCTCAGCAT CCCTGCGATG
CTGATCATGT TCATGGCCGT GATCGGAACC GGTTCCCGCA CTCCGCTGGT GGCGCTGACC
ATGGCCGCAT TGTGGCTCAG CCTGATTTGC TGGAACCGTC GCTCACTGGT ACTGCTGGGC
ACACTCGCGA TCGGTGGCGC AACGGTGGTG GTGCTGTTCT CGAAAATGAT CATCGAACGC
GGTGACTCCT ATCGTTTCGA GATCTGGCAG CAAGCCCTGG AAAAAATCGC CGAGCATCCG
TGGATCGGCC ACGGTTACAA CGCGGTTCTG GCGATTGACC CAGGCGTCGG TTACAACTTC
CAGGAACCGC ACAGCTTTGC GCTGGGAGTG CTTTATTACG TCGGCATCCT CGGCATGCTG
CCCTGGCTGT TTTTCCAGGC CTGGGGGCTG CTGAGCAGCT GGCGTCAGCG CGTGCAGCCA
TTGCTGATCA TCGCCTCGAC CTGGCTGGTG TTCGGCATCG GTGCCGGGCT GACCGAAGGC
GGCGGAATCA TTTCCCGCCC CAAGGAACAC TGGTTCCTGC TGTGGATTCC TTTGGCGCTG
ATTGCGGCCC TGAGCATCAA TCAACGTGCC CGACGGCTTT TGGCAATGCC GGTACAAAAG
CTGTCGGCAA CCGCTCTGCA ACAGCTGAGC AGCGACGCCC AGGTCATCGA GGAAGATGGA
TTGGGGCCCA AGGTCCTGCG CCTGTCCGAT GGCAGTTTCC TCAAACTGTT TCGCCATCGC
CGCTGGTATA CATCGGGCAG CTTCAACCCG TATTCCGAGC GGTTTGCCGT CAACAGCGAA
CAGCTGCGCC GGATGGGCAT TCCCACGCCA CAGGTGCTCA ACCTCTATCG CCTCGACGAC
GGCAGCAGCG CCGTGCATTA CACGCCGCTG CCGGGCCACA CCCTGCGCCA GGTGCTGCAG
GGGATCACCG CGCCTGCAGT GCGTCATGCG CTGGTGGAGC GTTTCGGCAA ATTCATGGCC
AGCCTGCATG AGCAAGGCGT GTATTTCCGC TCGCTGCATC TGGGCAATGT GCTGGTGCTG
GAAGACGGAG AGTTCGGGCT GATCGATCTG GCCGACCTGC GGATCTACCC TTCCCCCCTC
AGCCTGTCAC TGCGCCAGCG TAATCTGCGC CACATGCAAC GCTACACCGT CGACAGACGC
TGGCTGTTCG AGGATCACCT CGAGGCACTG CTCCAGGGAT ACGCCGTAAC GGCGTCGAAA
TCCGCCGTAG ACAATCTGCA CAGGCAAGTG CTGGCCGGCA ACACGCCGGC TAGGGTTCAT
TGA
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| Protein sequence | MQFSGFSSTS SRIFDFISLW ILPVGYFLLL CALFFLPGRS LHHKLFYGLF SIPTLIALCL
RPRELKEMLR EPVFIALLLF AGWALLSLCW GPQDEPIGGM FKPPLHTLML FAGCFLLVRY
RSDILTPLLF AAALVALIAT IAFLIPFMLH FEPGARLIGG GAFDNPLLSS HLFGFFCAYW
LSLSMTCKNR RLYWLSIPAM LIMFMAVIGT GSRTPLVALT MAALWLSLIC WNRRSLVLLG
TLAIGGATVV VLFSKMIIER GDSYRFEIWQ QALEKIAEHP WIGHGYNAVL AIDPGVGYNF
QEPHSFALGV LYYVGILGML PWLFFQAWGL LSSWRQRVQP LLIIASTWLV FGIGAGLTEG
GGIISRPKEH WFLLWIPLAL IAALSINQRA RRLLAMPVQK LSATALQQLS SDAQVIEEDG
LGPKVLRLSD GSFLKLFRHR RWYTSGSFNP YSERFAVNSE QLRRMGIPTP QVLNLYRLDD
GSSAVHYTPL PGHTLRQVLQ GITAPAVRHA LVERFGKFMA SLHEQGVYFR SLHLGNVLVL
EDGEFGLIDL ADLRIYPSPL SLSLRQRNLR HMQRYTVDRR WLFEDHLEAL LQGYAVTASK
SAVDNLHRQV LAGNTPARVH
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