Gene Pfl01_0478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0478 
Symbol 
ID3713235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp553435 
End bp554337 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content58% 
IMG OID 
Productglycosyl transferase family protein 
Protein accessionYP_346211 
Protein GI77456706 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATT CAGCAGCCAC GAGCGCTGAG CAACCTCTCG TTACCGTCAT CATTGCGTCC 
TACAACCACG GACCGTACAT CGAGGAGAGC ATCCTCAGCG TCATCAACCA GAGCTACAAG
AACATCGAGC TGCTGGTCGT CGACGACGGA TCGAAAGATG ACAGTGTCGA GCGCATCAAT
GCCCTGCAGG CCCAATACGG CTTCGATTTC CGGGTGCAGC AGAACCAGGG CCTGACCAAT
ACGCTCAACG GCGCGATCGC TCGGGCCAAG GGCAGCCTGA TCGTGCCGTT CGGTTCCGAC
GACATCATGT ACCCGGACCG GATCGACACC CAGGTCGCTT ATATGGACGG CAAACCGGAA
GTGGGTATCT GCGCCGGCAA CATCGAATTG ATGGACGCTG ACGGCAATCT CTATCCGGAA
AAGCGTCAGC GCCGGGACGT GCCGTTCCGG CGCCTGGATT TTGATGACAT GTTCCTGGAG
CGCAAGCCGT ATCCGCCGGC GCCGACCCTG ATGATCCGCC GTGAGGCACT GGACAAGGTG
GGCGGGTTCG ACCCGACGAT TCGTCTTGAA GATCTGTACA TCGAGCTGAA AATCACCCGC
GCCGGTTACT TCATCGATGG TCTGAACGTG GTGATGGCGC GCTATCGCAA GCACGCCACC
AACTCCTACA AGAATCACCG TTTCATGATC GAGAACATCC TGCGTACCTA CGCGTTGTTC
AGCGATCATC CGCTGTACGA CGAAGTGCGC TACAAGTCGC TCAACTCGAT GTTCCTGAAG
ACTGCCAACC GCGACCGCAA ACTGGCGCGG GAACTGCTGG CGCAAATCCC GTTCAAGGCC
TGGAACAAGA AGACCTGGCG CGGGTTGGGC CGGTTGCTGT TTTCGCCGCT GGAAAAAGAT
TGA
 
Protein sequence
MSDSAATSAE QPLVTVIIAS YNHGPYIEES ILSVINQSYK NIELLVVDDG SKDDSVERIN 
ALQAQYGFDF RVQQNQGLTN TLNGAIARAK GSLIVPFGSD DIMYPDRIDT QVAYMDGKPE
VGICAGNIEL MDADGNLYPE KRQRRDVPFR RLDFDDMFLE RKPYPPAPTL MIRREALDKV
GGFDPTIRLE DLYIELKITR AGYFIDGLNV VMARYRKHAT NSYKNHRFMI ENILRTYALF
SDHPLYDEVR YKSLNSMFLK TANRDRKLAR ELLAQIPFKA WNKKTWRGLG RLLFSPLEKD