Gene Pfl01_0474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0474 
Symbol 
ID3713231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp548807 
End bp549937 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content64% 
IMG OID 
Productglycosyl transferase, group 1 
Protein accessionYP_346207 
Protein GI77456702 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.249061 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGCT CGGCTGAACG CCATGTGCTG CAGTTCTGTC ACGGCTATGA CGGGCCGTTC 
CTCGACTGCG CGCGGCAGTA CGCCAGCCTG TTCGCGGGCA CCGGTTATCG GGTCACCACG
GTCTTTCTGA CCGGGGCTGC CGATAGCGAG GTGGCCGCGG CCTGCGCCTC CGATGAAGTG
TTGTTCATGG AATACAGCTC CAAGGCCATT CGTGGCCTGA AGCTGGGCGC CATCGGCGAT
CTGCGCAAGA TCGCCGCTTC ACGCAATTTC AGTTTCTGTA TCGCCCATCG CTTCAAGCCG
ATCTACATCG CCTTGCTCGG CACTTCGCTG CCGGTGATCG GCGTGCACCA CGCGTTTGGC
GATTACAAAC GCGGTTCGCG CAAACTCTTT GCGCACATTT TCCGCAAGCG TCTGAGCCTG
CTCGGCGTGT CCGATGCGGT GCGCGACGAC ATGCGCCGCT GCCTGCCGAA ATGGCCGGCG
ACACGAATCC AGACCCTCTA CAACCGCATC GATGTCTCTG CGTTGCAGAT GAGTCAGGTG
TCCGCCCGCG AAGCCCGCGA GACCCTCGGT CTTTCAGCGG ATGCGTTCAT TGTCGGCAAC
GTCGGTCGCC TGCACCCGGA CAAGGATCAG GCCACGCTGC TGCGTGGTTT TGCCGCGGCG
CTGCCCGGTC TGCCGGCCAA CAGCCAACTG GTGATTCTCG GCAAGGGGCG TCTCGAGGAT
GAACTCAAGG CGCAGGCCCG TGAGCTGGGC GTTGGAGATC GGGTGCTGTT CCTCGGCCAG
GTGCCGGACG CGCGTAATTA TTTCCGCGCA TTCGATGTGT TTGCCTTGAG TTCCGACCAC
GAACCGTTCG GCATGGTGCT GCTGGAGGCC ATGGCCGCCG GCGTGCCGTT GCTGGCCACG
GCGTGCGGCG GGGCGAAGGA AGTGGTCGAA GGCGTCGGGA TCCTGTTTCC GCTGGGTGAC
GCCGAGCATC TGGCCCAGGG CCTGAAACAT CTGGCCGGCA TGGACGAGCA GCAGCGTCGT
CAGTGCGCCG AGATGATGTT CGACCGCCTG CGCGAGCGCT TCTCCGACCG CGCCGTACGC
GACACCTTCT GGCATTTGCC GCAAGTTACC GATCTGGCAC CGAGGGGCTG A
 
Protein sequence
MTRSAERHVL QFCHGYDGPF LDCARQYASL FAGTGYRVTT VFLTGAADSE VAAACASDEV 
LFMEYSSKAI RGLKLGAIGD LRKIAASRNF SFCIAHRFKP IYIALLGTSL PVIGVHHAFG
DYKRGSRKLF AHIFRKRLSL LGVSDAVRDD MRRCLPKWPA TRIQTLYNRI DVSALQMSQV
SAREARETLG LSADAFIVGN VGRLHPDKDQ ATLLRGFAAA LPGLPANSQL VILGKGRLED
ELKAQARELG VGDRVLFLGQ VPDARNYFRA FDVFALSSDH EPFGMVLLEA MAAGVPLLAT
ACGGAKEVVE GVGILFPLGD AEHLAQGLKH LAGMDEQQRR QCAEMMFDRL RERFSDRAVR
DTFWHLPQVT DLAPRG