| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0461 |
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| Symbol | |
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| ID | 3712856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 529774 |
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| End bp | 531183 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | phosphodiesterase/alkaline phosphatase D-like |
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| Protein accession | YP_346194 |
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| Protein GI | 77456689 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00298068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTCGA ACATGCTGAA ACCTACTGTC GGCCCGATCA TTGGTCACAC AACAACTAAT
CAGGCGCGAA TCTTTATTCG TGGCGGGCTG CAACATAACG CGGCCGTATT TGCCGGCATC
CGTTACCGAA CATTGGATTC CAAACAATGG CAACCGAGCC AGTTTGTCAA ACTCGATCCA
ACCCGTGACA TGACTGAAGT GCTGGTGCTC GATCATTTGC AAGCCGACAC GGACTACGAA
TACCAGACCG GCTGGTTCAG CCCGATGAGT CCTGTCCATA CCATCCACAG CGTGGCGGAG
TTGCCGCTGC AATGGCCACG GGAGACTTAT CGCCTGCGCA CCCGCAGCCA TCAGCCCTTA
CAACCCCGCG CCTACATCCT CGGTTCGTGT CGCTACCTGC GCATGACATC CGGCATCCCG
GTGCTCCCGC ATCTGGGCGA CCGGATCTTC GCTTCCATCA GCCAATTGAT CGAAGGCGCA
CAACCTGCGA TCAGCGCCAT CATGATGTGT GGCGATCAGA TCTATGCCGA CGATCTGAAC
CTGTTCGCTC CGGACCGCGA CTATGACGAG ATCATTGCAA AGTATCGTGC GGCGTTTTCC
CTGCCTAACA TTCGACGACT GATGTCCGGC ACTTCGACTT ACATGATTCT GGATGATCAT
GAAATAGAAG ATAACTGGCC AATGAACGCC GAAAAATCCG ACGACATACT GTTTCGCAAT
GCAATGGCGG CTTACGAAAT CTATCAAGCA AGTCATAGCC CGATCTGCTC GACAACAACT
AACGGCACAA TCGACCTAAC TTCGCTGAAG CACTACTGGT ATCAATTCAG CGACGGCGAT
ATCGAATGGT TTGTGACTGA CAGTCGAACT CGCCGCAACT TGTCGAGGGA CAACCGCCGC
CTCCTCGACG AAGAACAGGA ACAGGCCCTG TGCAAGTGGC TGGTCGAAAG CCCGGCGCGG
GTCAAGTTCG TGGTCACCAG CGTCATGTTC TACCCTGACC GCAAATTGAA CGGCGATGAT
GCCTGGGCAG GCTTCCCCGA ACAGCGCCTG CGTCTGCTGG AAACCATCCG CCGGCATCGG
ATCAGGAACG TCGTGTTCAT TTCCGGCGAT GTGCATGGTT CGCTGACCAG TCGCCTGAGC
CACAGCGAAG ACCCGGAGTT TGAAGTCCAC ACCGTCGTGT CTTCGCCGCT GAGCAACAGC
AAACTGCTGC CCTACGCCAC CGCCGCGACC TTCACGCTTG ATCAGCCACT GGCGCAGACC
GAGGCAGGCA CATACCGGCA CGCGCTGACC AGCCAGGTCA TCAGCCAGGA CAACTTTGCA
CACATGGTGG TCGAGGCCGA GCGGATCCAG GTCAACTATC ACGACCGGGA TGGCAGGCAC
CTGCAATCCA TCGATATTCC GTTGCGATGA
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| Protein sequence | MDSNMLKPTV GPIIGHTTTN QARIFIRGGL QHNAAVFAGI RYRTLDSKQW QPSQFVKLDP
TRDMTEVLVL DHLQADTDYE YQTGWFSPMS PVHTIHSVAE LPLQWPRETY RLRTRSHQPL
QPRAYILGSC RYLRMTSGIP VLPHLGDRIF ASISQLIEGA QPAISAIMMC GDQIYADDLN
LFAPDRDYDE IIAKYRAAFS LPNIRRLMSG TSTYMILDDH EIEDNWPMNA EKSDDILFRN
AMAAYEIYQA SHSPICSTTT NGTIDLTSLK HYWYQFSDGD IEWFVTDSRT RRNLSRDNRR
LLDEEQEQAL CKWLVESPAR VKFVVTSVMF YPDRKLNGDD AWAGFPEQRL RLLETIRRHR
IRNVVFISGD VHGSLTSRLS HSEDPEFEVH TVVSSPLSNS KLLPYATAAT FTLDQPLAQT
EAGTYRHALT SQVISQDNFA HMVVEAERIQ VNYHDRDGRH LQSIDIPLR
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