| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0460 |
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| Symbol | |
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| ID | 3712855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 526838 |
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| End bp | 529534 |
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| Gene Length | 2697 bp |
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| Protein Length | 898 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_346193 |
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| Protein GI | 77456688 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.154132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGCC AACCCGATGC CGCCAGCCGT ATGGTGGCCG AGGTAGTGAC GCAGTTGCCT
GTGCCCTCGC GGCTCGGCAT GCTGCGTTTC GAGCGCTTGA ATGAAGCCAG TTGGGCCATG
TTGTTTCTCG ATCCCAACTG TGAACGCCAG TTCGGCCAGC CCGCCGTCGA ACTTTGCGCC
TTGGTCGGCT CGCCCTACGC CAGCCTGATG GAGCCCGAAG CGCGCTATCA GTTGCATGAC
GCAATCCAGC AACAACTCGG CCAAAGCCCG CATTACCTGG TGCGCTATAC CCTGCACACC
GCCGCCGGCG CGCTGAGCAT TCTTGAACTG GGCGAAGCCT ACAAACAGCA CAACCGCCAC
TTGCTGCGCG GTTACTTGCT GGCGGTCGAC AATGTGTTCG ACGAGACACC TTCGCTGCCG
TCCGTCGACC TTGAAACCCA GAATTCACGC CTGCAAATCG CCCTTGAGCT CAATCAGCGT
GCCCAGCAGG AACAACTGCA GCATCTGGAA CGGGTGCGAG CCCAACAGGA CCTGATCCTG
TTGCTGGCCC GCCAGCGCTA CAGCAGCCAG AACTCCCTGC AGGAAGCGGC CGAGCTGATC
ACCCGCTGCG CTTGCGATAT CTACGAAATC GACTGTGCCA GCCTGTGGAA CCTCGAAGGC
CAGAAGCTGG TGCCAATCTC GGCGTATCAC CGCGCCACCC AGGAATACAT TCTGCCGGAC
GTGATCGACG TCAGCGGCTT CCCCGATTAC ATGGACGCGC TGCACGGTAG CCGCGCCATC
GACGCGCACA ACGCAATGCG CGACCCGCGT ACCCGGGAAA TGGCCGAAGC CCTGCGCCCG
CGTGACGTTA ACGCCATGCT CGACGCCAGC ATCCGCGTCG ACGGCCAGGT GGTCGGCGTG
TTGTGCCTGG AGCAGACCGG TGTCACCCGC GCCTGGCAGT CCGACGAAAT CGCCTTTGCC
GGTGAACTGG CCGACCAGTT CGCCCAGGTC ATCAACAACC ACAATCGCCG CACCGCCACC
AGCGCCCTGC ACCTGTTCCA GCGCGCGGTC GAGCAAAGCG CCAACGCCTT CCTGCTGGTC
AATTGCGACG GCGTGGTCGA GTACGTCAAT CCGAGCTTCA CGGCGATCAC CCAGTACACC
ACTGAGGAAG TCCACGGCCA GCGCCTGTCG GAGCTGCCGG CCCTGGAAAA CCTCAGCGAG
CTGCTGTTCG ACGCGCCCTC GGCGCTGGCC AAAAGCAATA GCTGGCAGGG CGAATTCAAA
AGCCGCCGGA AAAACCTCGA ACCCTACTGG GGCCAGTTGT CGATTTCCAA GGTCTACGGT
GACAACCGTG AGCTGACGCA TTACATCGGC ATTTACGAAG ACATCACCCA GACCAAACTG
GCGCAGCAGC GCATCGAGCG CCTGGCCTAC ACCGACAACC TGACCAACCT CGGCAACCGG
CCTGCATTTA TCCGCAACCT GGATGAACGC TTCGCCCGTG ACAGCGATAC CCCGATCAGC
CTGCTGCTGG TGGACATCGA CAACTTCAAG CGGATCAACG ACAGCCTCGG CCACCAGACC
GGTGACAAGC TGTTGATCAG CCTGGCCCGG CGCCTGCGCA ACAGCCTGAG CCCCAGCGGC
AGCCTGGCGC GGTTCGCCAG TAATGAATTC GCGGTGTTGC TCGACGACAC TGACCTTGCC
ACCGGGCAGC AGATCGCCAA TCAATTGCTG GCGACGCTGG ATAAACCGAT GTTCGTCGAC
AACCAGCTGA TCAGCGTCAC CGGCTCCGTG GGCCTGGCCT GCGCGCCGCT GCACGGCCGC
GACCCACAGA CCCTGATGCG CAACGCCGGC CTCGCTCTGC ACAAGGCCAA GGCCAACGGC
AAACATCAGG TCCAGGTGTT CACCGAAGCG CTGAACGCCG AGGCCAGCTA CAAACTGTTC
GTCGAGAACA ACCTGCGCCG CGCCCTGACC CAGAACGAGC TGGACGTGTT CTATCAGCCG
AAGCTGTGCC TGCGCAGCGG CCGATTGCTG GGCATGGAAG CGCTTCTGCG CTGGAATCAC
CCGGAGCGCG GCATGATCCG CCCGGATCAG TTCATCAGCG TCGCCGAGGA AACCGGCCTG
ATCATCCCGA TCGGCAAGTG GATCGCCCGC CAGGCCTGCC GCATGAGCAA GGCGCTGACC
GCCGCCGGCA TGGGCAATCT GCAAGTGGCG ATCAACCTGT CGCCCAAGCA GTTTTCCGAC
CCGGATCTGG TGGCCTCGAT CGCCAACATC CTCAAGGAAG AAGCGCTGCC GGCCAATCTG
CTGGAACTGG AACTGACCGA AGGCCTGCTG CTGGAAGCCA CCGAAGACAC CCACTTGCAG
CTCGACCAGC TCAAGCGTCT GGGCCTGACC CTGGCCATGG ACGACTTCGG AACCGGTTAC
TCGTCGCTCA GCTACCTGAA AAAATTCCCG ATCGACATCA TCAAGATCGA TCGCAGCTTC
ATCCACGAAA TCCCGGACAA CCAGGACGAC ATGGAAATCA CCTCCGCCGT GATCGCCATG
GCCCACAACC TGAAACTCAA GGTCGTGGCC GAAGGCATCG AGACCGCCGA GCAACTGGCG
TTCCTGCGCC GGCACCGCTG CGACGTTGGC CAGGGCTATC TGTTCGACCG GCCGATTCCG
GGCGGCGAGC TGATCCAGGC ACTCAAGCGC TACCCGCGTG GCCCACTCTC TCTGTAA
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| Protein sequence | MKSQPDAASR MVAEVVTQLP VPSRLGMLRF ERLNEASWAM LFLDPNCERQ FGQPAVELCA
LVGSPYASLM EPEARYQLHD AIQQQLGQSP HYLVRYTLHT AAGALSILEL GEAYKQHNRH
LLRGYLLAVD NVFDETPSLP SVDLETQNSR LQIALELNQR AQQEQLQHLE RVRAQQDLIL
LLARQRYSSQ NSLQEAAELI TRCACDIYEI DCASLWNLEG QKLVPISAYH RATQEYILPD
VIDVSGFPDY MDALHGSRAI DAHNAMRDPR TREMAEALRP RDVNAMLDAS IRVDGQVVGV
LCLEQTGVTR AWQSDEIAFA GELADQFAQV INNHNRRTAT SALHLFQRAV EQSANAFLLV
NCDGVVEYVN PSFTAITQYT TEEVHGQRLS ELPALENLSE LLFDAPSALA KSNSWQGEFK
SRRKNLEPYW GQLSISKVYG DNRELTHYIG IYEDITQTKL AQQRIERLAY TDNLTNLGNR
PAFIRNLDER FARDSDTPIS LLLVDIDNFK RINDSLGHQT GDKLLISLAR RLRNSLSPSG
SLARFASNEF AVLLDDTDLA TGQQIANQLL ATLDKPMFVD NQLISVTGSV GLACAPLHGR
DPQTLMRNAG LALHKAKANG KHQVQVFTEA LNAEASYKLF VENNLRRALT QNELDVFYQP
KLCLRSGRLL GMEALLRWNH PERGMIRPDQ FISVAEETGL IIPIGKWIAR QACRMSKALT
AAGMGNLQVA INLSPKQFSD PDLVASIANI LKEEALPANL LELELTEGLL LEATEDTHLQ
LDQLKRLGLT LAMDDFGTGY SSLSYLKKFP IDIIKIDRSF IHEIPDNQDD MEITSAVIAM
AHNLKLKVVA EGIETAEQLA FLRRHRCDVG QGYLFDRPIP GGELIQALKR YPRGPLSL
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