Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0452 |
Symbol | putA |
ID | 3712847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 514599 |
End bp | 518552 |
Gene Length | 3954 bp |
Protein Length | 1317 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_346185 |
Protein GI | 77456680 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTACCA CCACCCTTGG GGTCAAACTT GACGACCCGA CCCGCGAACG CCTGAAGGCC GCCGCAACCT CGATTGATCG CACACCGCAC TGGCTGATCA AGCAGGCAAT TTTCAATTAC CTGGAGAAAC TCGAGGGTGG TGCAACCCTG ACCGAGCTGA ACGGTTTGAC CGCCAAGGAC GCCGACGACG CGGGCGAAGT CCATACCGAT CACGCTCACC AATGCTTCCT CGAATTCGCC GAAAGCATCC TGCCGCAATC GGTGCTGCGC GCCTCGATCA CCGCCGCTTA CCGACGCCCC GAGCCGGAAG TGGTGCCGAT GCTGATCGAG CAGGCGCGCC TGCCGGCGCC GATGGCCGAA GCCACCAACA AACTCGCCGC AACCATCGCG GAAAAACTGC GTAACCAGAA GAGTGCCGGC GGTCGTGCAG GTATTGTTCA GGGCCTGTTG CAGGAATTTT CCCTGTCGTC CCAGGAAGGC GTGGCGCTGA TGTGCCTGGC CGAAGCACTG CTGCGGATCC CGGACAAAGG CACTCGCGAT GCGCTGATCC GCGACAAGAT CAGCACCGGC AACTGGCAGC CGCACTTGGG CAACAGCCCG TCGCTGTTCG TCAACGCGGC GACCTGGGGT CTGCTGCTGA CCGGCAAACT GGTTTCCACT CACAACGAAG CCGGCCTGAC TTCGTCCCTG AGCCGCATCA TCGGCAAGAG CGGCGAGCCG ATGATCCGCA AGGGCGTCGA CATGGCCATG CGCCTGATGG GCGAGCAGTT CGTTACCGGC GAAACCATCG CCGAAGCCCT GGCCAACGCG AGCAAGTTCG AAGCCAAGGG TTTCCGCTAT TCCTACGACA TGCTCGGTGA AGCGGCGCTG ACCGAACACG ACGCCCAGAA GTACCTGGCC TCGTACGAAC AAGCCATTCA CTCGATCGGC AAAGCGTCCC ACGGCCGTGG GATTTATGAA GGTCCGGGCA TCTCGATCAA GCTGTCGGCC CTGCACCCGC GTTACAGCCG TGCCCAGTAC GAGCGCGTGA TGGACGAGCT GTACCCGCGC CTGCTGTCGC TGACCCTGCT GGCCAAGCAA TACGACATCG GCCTGAACAT CGACGCCGAA GAAGCCGACC GCCTGGAGCT GTCGCTGGAT CTGCTCGAGC GTCTGTGCTT CGAGCCGCAA CTGACCGGCT GGAACGGCAT CGGTTTCGTG ATCCAGGCCT ACCAGAAGCG TTGCCCGTAC GTGATCGACT ACGTGATCGA CCTGGCTCGC CGCAGCCGTC ATCGCCTGAT GATCCGTCTG GTGAAAGGCG CGTACTGGGA CAGCGAAATC AAGCGCGCCC AGGTCGAAGG CCTGGAAGGC TATCCGGTCT ACACCCGCAA GGTGTACACC GACGTTTCCT ACATCGCCTG CGCCCGCAAA CTGTTGTCGG TGCCGGAAGT CATTTACCCG CAGTTCGCTA CGCACAACGC CCACACCCTG TCGGCGATTT ATCACATTGC CGGTCAGAAC TATTACCCGG GCCAGTACGA ATTCCAGTGC CTGCACGGCA TGGGCGAACC GTTGTACGAA CAGGTTGTAG GCAAGGTTTC CGAAGGCAAG CTGAACCGTC CGTGCCGCGT GTACGCTCCG GTCGGCACCC ACGAAACCCT GCTGGCGTAC CTCGTACGTC GTCTGCTGGA AAACGGTGCC AACACCTCGT TCGTCAACCG CATCGCCGAC CAGTCGGTTT CGATTCAGGA GCTGGTGGCC GATCCGGTGG CACAGATCGA GCAGATGGCG ACCGTGGAAG GTGGTTTCGG CCTGCCGCAC CCGCGCATCC CGCTGCCGCG TGACCTGTAT GGCTCCGAGC GCGCCAACTC TGCCGGCATC GACATGGCCA ACGAACATCG TCTGGCGTCG CTGTCCTGCG CCCTGCTGGC CACCGCGCAC AACAACTGGA AAGCCGCGCC GATGCTCGGT TGCGCCTCCA GCAACGAAGC GCCGGCACCG GTGCTGAACC CGTCCGATCT GCGTGACGTG GTCGGCCATG TGCAGGAAGC CACGGTCGAA GACGTCGACA ACGCCATTCA ATGCGCCCTG AACGCCGCAC CGATCTGGCA GGCCACCCCG CCGGCCGAAC GTGCCGCGAT TCTGGAACGT GCCGCTGACT TGATGGAAGG CGAGATCCAG CCGCTGATGG GCCTGCTGGC CCGCGAAGCC GGCAAGACCT TCGCCAACGC CATCGCCGAA GTCCGCGAAG CCGTCGATTT CCTGCGTTAT TACGCGGTGC AGGCACGCAA CGATTTCAGC AACGACGCCC ACCGCCCACT GGGCCCGGTG GTGTGCATCA GCCCATGGAA CTTCCCGCTG GCGATCTTCA GCGGCCAAGT TGCCGCGGCA CTGGCCGCCG GTAACCCGGT GCTGGCCAAA CCGGCCGAAC AGACTCCGCT GGTCGCCGCA CAAGCCGTAC GCCTGCTGCT CGAAGCCGGG ATTCCGGAAG GCGTGCTGCA ACTGCTGCCG GGTCGCGGTG AAACCGTCGG CGCCGGTCTG GTCGGCGATG AACGCGTCAA AGGCGTGATG TTCACCGGCT CCACCGAAGT CGCGCGTCTG CTGCAACGCA ACATCGCCGG TCGCCTCGAC AACCAGGGCC GTCCGATTCC GCTGATCGCC GAAACCGGCG GCCAGAACGC GATGATCGTC GACTCTTCGG CACTGACCGA ACAGGTGGTG ATCGACGTGG TGTCGTCGGC CTTCGACAGC GCCGGTCAGC GTTGCTCGGC CCTGCGCGTC CTGTGCTTGC AGGAAGATTC CGCTGATCGC GTCATCGAAA TGCTTAAAGG TGCGATGGCT GAAAGCCGTC TCGGCAACCC GGAGCGCCTG TCCGTGGACA TCGGCCCGGT GATCGACGCC GAAGCCAAGG CCGGCATCGA GAAGCACATC CAGGGCATGC GCGACAAAGG TCGCAACGTG TACCAGGTGG CTATTGCCGA TACCGAGGAA GTCAAACGCG GCACCTTCGT CATGCCGACC CTGATCGAGC TGGAAAGCTT CGACGAACTG CAACGCGAGA TCTTCGGCCC GGTGCTGCAC GTGGTGCGCT ACAAGCGTAA AGAGATCGAC CAGTTGATCG CCCAGATCAA CGCCTCCGGT TACGGCCTGA CCCTCGGCGT GCACACCCGC ATCGACGAGA CCATCGCCAA GGTGATCGAC AACGTCAACG CCGGTAACGT CTACGTCAAC CGCAACATCG TGGGTGCCGT GGTCGGCGTC CAGCCATTCG GTGGTGAAGG CCTGTCGGGT ACTGGCCCGA AAGCCGGTGG CCCGCTGTAC CTGTACCGTC TGCTGTCGAC GCGTCCTACC GATGCCATCG AACAATCCTT CGCTCGCGCT GATGCTGCCG TGGCGCCGGA CGTTCGTCTG CGCGACGCCA TGAGCAAACC GCTGACCGCT CTGAAAGCCT GGGCCGACAG CAACAAGTTC GCCGACCTGA GCACCCTGTG CGTGCAGTAC GCGGCGCAGT CGCAAAGCGG TATCACCCGC GTACTGGCCG GCCCGACCGG CGAGAAGAAC AGCTACGCGA TCCTGCCGCG CGAGCACGTG CTGTGCCTGG CGGACATCGA AGGTGATCTG CTGACCCAAC TCGCTGCAGT ACTGGCAGTA GGCGGTTCGG CAGTCTGGCC GGAATCCGAC ACCAGCAAGG CATTGTTCGC ACGCCTGCCG AAGGAAATTC AGGCGCGAAT CAAACTGGTT TCCGACTGGA ACAAGGACGA CGTGGTGTTC GACGCGGTTC TGCATCACGG CCATTCCGAC CAGTTGCGTG CGGTCTGCCA GCAGATCGCC AAGCGTGCCG GCGCCATCGT CGGGGTTCAG GGCCTGTCCC AGGGCGAGAC CAACATTGCA CTGGAGCGTC TGGTGATCGA GCGTGCGTTG AGCGTCAACA CCGCGGCAGC AGGCGGCAAC GCCAGTCTGA TGACCATCGG TTAA
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Protein sequence | MATTTLGVKL DDPTRERLKA AATSIDRTPH WLIKQAIFNY LEKLEGGATL TELNGLTAKD ADDAGEVHTD HAHQCFLEFA ESILPQSVLR ASITAAYRRP EPEVVPMLIE QARLPAPMAE ATNKLAATIA EKLRNQKSAG GRAGIVQGLL QEFSLSSQEG VALMCLAEAL LRIPDKGTRD ALIRDKISTG NWQPHLGNSP SLFVNAATWG LLLTGKLVST HNEAGLTSSL SRIIGKSGEP MIRKGVDMAM RLMGEQFVTG ETIAEALANA SKFEAKGFRY SYDMLGEAAL TEHDAQKYLA SYEQAIHSIG KASHGRGIYE GPGISIKLSA LHPRYSRAQY ERVMDELYPR LLSLTLLAKQ YDIGLNIDAE EADRLELSLD LLERLCFEPQ LTGWNGIGFV IQAYQKRCPY VIDYVIDLAR RSRHRLMIRL VKGAYWDSEI KRAQVEGLEG YPVYTRKVYT DVSYIACARK LLSVPEVIYP QFATHNAHTL SAIYHIAGQN YYPGQYEFQC LHGMGEPLYE QVVGKVSEGK LNRPCRVYAP VGTHETLLAY LVRRLLENGA NTSFVNRIAD QSVSIQELVA DPVAQIEQMA TVEGGFGLPH PRIPLPRDLY GSERANSAGI DMANEHRLAS LSCALLATAH NNWKAAPMLG CASSNEAPAP VLNPSDLRDV VGHVQEATVE DVDNAIQCAL NAAPIWQATP PAERAAILER AADLMEGEIQ PLMGLLAREA GKTFANAIAE VREAVDFLRY YAVQARNDFS NDAHRPLGPV VCISPWNFPL AIFSGQVAAA LAAGNPVLAK PAEQTPLVAA QAVRLLLEAG IPEGVLQLLP GRGETVGAGL VGDERVKGVM FTGSTEVARL LQRNIAGRLD NQGRPIPLIA ETGGQNAMIV DSSALTEQVV IDVVSSAFDS AGQRCSALRV LCLQEDSADR VIEMLKGAMA ESRLGNPERL SVDIGPVIDA EAKAGIEKHI QGMRDKGRNV YQVAIADTEE VKRGTFVMPT LIELESFDEL QREIFGPVLH VVRYKRKEID QLIAQINASG YGLTLGVHTR IDETIAKVID NVNAGNVYVN RNIVGAVVGV QPFGGEGLSG TGPKAGGPLY LYRLLSTRPT DAIEQSFARA DAAVAPDVRL RDAMSKPLTA LKAWADSNKF ADLSTLCVQY AAQSQSGITR VLAGPTGEKN SYAILPREHV LCLADIEGDL LTQLAAVLAV GGSAVWPESD TSKALFARLP KEIQARIKLV SDWNKDDVVF DAVLHHGHSD QLRAVCQQIA KRAGAIVGVQ GLSQGETNIA LERLVIERAL SVNTAAAGGN ASLMTIG
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