Gene Pfl01_0452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0452 
SymbolputA 
ID3712847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp514599 
End bp518552 
Gene Length3954 bp 
Protein Length1317 aa 
Translation table11 
GC content63% 
IMG OID 
Producttrifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 
Protein accessionYP_346185 
Protein GI77456680 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACCA CCACCCTTGG GGTCAAACTT GACGACCCGA CCCGCGAACG CCTGAAGGCC 
GCCGCAACCT CGATTGATCG CACACCGCAC TGGCTGATCA AGCAGGCAAT TTTCAATTAC
CTGGAGAAAC TCGAGGGTGG TGCAACCCTG ACCGAGCTGA ACGGTTTGAC CGCCAAGGAC
GCCGACGACG CGGGCGAAGT CCATACCGAT CACGCTCACC AATGCTTCCT CGAATTCGCC
GAAAGCATCC TGCCGCAATC GGTGCTGCGC GCCTCGATCA CCGCCGCTTA CCGACGCCCC
GAGCCGGAAG TGGTGCCGAT GCTGATCGAG CAGGCGCGCC TGCCGGCGCC GATGGCCGAA
GCCACCAACA AACTCGCCGC AACCATCGCG GAAAAACTGC GTAACCAGAA GAGTGCCGGC
GGTCGTGCAG GTATTGTTCA GGGCCTGTTG CAGGAATTTT CCCTGTCGTC CCAGGAAGGC
GTGGCGCTGA TGTGCCTGGC CGAAGCACTG CTGCGGATCC CGGACAAAGG CACTCGCGAT
GCGCTGATCC GCGACAAGAT CAGCACCGGC AACTGGCAGC CGCACTTGGG CAACAGCCCG
TCGCTGTTCG TCAACGCGGC GACCTGGGGT CTGCTGCTGA CCGGCAAACT GGTTTCCACT
CACAACGAAG CCGGCCTGAC TTCGTCCCTG AGCCGCATCA TCGGCAAGAG CGGCGAGCCG
ATGATCCGCA AGGGCGTCGA CATGGCCATG CGCCTGATGG GCGAGCAGTT CGTTACCGGC
GAAACCATCG CCGAAGCCCT GGCCAACGCG AGCAAGTTCG AAGCCAAGGG TTTCCGCTAT
TCCTACGACA TGCTCGGTGA AGCGGCGCTG ACCGAACACG ACGCCCAGAA GTACCTGGCC
TCGTACGAAC AAGCCATTCA CTCGATCGGC AAAGCGTCCC ACGGCCGTGG GATTTATGAA
GGTCCGGGCA TCTCGATCAA GCTGTCGGCC CTGCACCCGC GTTACAGCCG TGCCCAGTAC
GAGCGCGTGA TGGACGAGCT GTACCCGCGC CTGCTGTCGC TGACCCTGCT GGCCAAGCAA
TACGACATCG GCCTGAACAT CGACGCCGAA GAAGCCGACC GCCTGGAGCT GTCGCTGGAT
CTGCTCGAGC GTCTGTGCTT CGAGCCGCAA CTGACCGGCT GGAACGGCAT CGGTTTCGTG
ATCCAGGCCT ACCAGAAGCG TTGCCCGTAC GTGATCGACT ACGTGATCGA CCTGGCTCGC
CGCAGCCGTC ATCGCCTGAT GATCCGTCTG GTGAAAGGCG CGTACTGGGA CAGCGAAATC
AAGCGCGCCC AGGTCGAAGG CCTGGAAGGC TATCCGGTCT ACACCCGCAA GGTGTACACC
GACGTTTCCT ACATCGCCTG CGCCCGCAAA CTGTTGTCGG TGCCGGAAGT CATTTACCCG
CAGTTCGCTA CGCACAACGC CCACACCCTG TCGGCGATTT ATCACATTGC CGGTCAGAAC
TATTACCCGG GCCAGTACGA ATTCCAGTGC CTGCACGGCA TGGGCGAACC GTTGTACGAA
CAGGTTGTAG GCAAGGTTTC CGAAGGCAAG CTGAACCGTC CGTGCCGCGT GTACGCTCCG
GTCGGCACCC ACGAAACCCT GCTGGCGTAC CTCGTACGTC GTCTGCTGGA AAACGGTGCC
AACACCTCGT TCGTCAACCG CATCGCCGAC CAGTCGGTTT CGATTCAGGA GCTGGTGGCC
GATCCGGTGG CACAGATCGA GCAGATGGCG ACCGTGGAAG GTGGTTTCGG CCTGCCGCAC
CCGCGCATCC CGCTGCCGCG TGACCTGTAT GGCTCCGAGC GCGCCAACTC TGCCGGCATC
GACATGGCCA ACGAACATCG TCTGGCGTCG CTGTCCTGCG CCCTGCTGGC CACCGCGCAC
AACAACTGGA AAGCCGCGCC GATGCTCGGT TGCGCCTCCA GCAACGAAGC GCCGGCACCG
GTGCTGAACC CGTCCGATCT GCGTGACGTG GTCGGCCATG TGCAGGAAGC CACGGTCGAA
GACGTCGACA ACGCCATTCA ATGCGCCCTG AACGCCGCAC CGATCTGGCA GGCCACCCCG
CCGGCCGAAC GTGCCGCGAT TCTGGAACGT GCCGCTGACT TGATGGAAGG CGAGATCCAG
CCGCTGATGG GCCTGCTGGC CCGCGAAGCC GGCAAGACCT TCGCCAACGC CATCGCCGAA
GTCCGCGAAG CCGTCGATTT CCTGCGTTAT TACGCGGTGC AGGCACGCAA CGATTTCAGC
AACGACGCCC ACCGCCCACT GGGCCCGGTG GTGTGCATCA GCCCATGGAA CTTCCCGCTG
GCGATCTTCA GCGGCCAAGT TGCCGCGGCA CTGGCCGCCG GTAACCCGGT GCTGGCCAAA
CCGGCCGAAC AGACTCCGCT GGTCGCCGCA CAAGCCGTAC GCCTGCTGCT CGAAGCCGGG
ATTCCGGAAG GCGTGCTGCA ACTGCTGCCG GGTCGCGGTG AAACCGTCGG CGCCGGTCTG
GTCGGCGATG AACGCGTCAA AGGCGTGATG TTCACCGGCT CCACCGAAGT CGCGCGTCTG
CTGCAACGCA ACATCGCCGG TCGCCTCGAC AACCAGGGCC GTCCGATTCC GCTGATCGCC
GAAACCGGCG GCCAGAACGC GATGATCGTC GACTCTTCGG CACTGACCGA ACAGGTGGTG
ATCGACGTGG TGTCGTCGGC CTTCGACAGC GCCGGTCAGC GTTGCTCGGC CCTGCGCGTC
CTGTGCTTGC AGGAAGATTC CGCTGATCGC GTCATCGAAA TGCTTAAAGG TGCGATGGCT
GAAAGCCGTC TCGGCAACCC GGAGCGCCTG TCCGTGGACA TCGGCCCGGT GATCGACGCC
GAAGCCAAGG CCGGCATCGA GAAGCACATC CAGGGCATGC GCGACAAAGG TCGCAACGTG
TACCAGGTGG CTATTGCCGA TACCGAGGAA GTCAAACGCG GCACCTTCGT CATGCCGACC
CTGATCGAGC TGGAAAGCTT CGACGAACTG CAACGCGAGA TCTTCGGCCC GGTGCTGCAC
GTGGTGCGCT ACAAGCGTAA AGAGATCGAC CAGTTGATCG CCCAGATCAA CGCCTCCGGT
TACGGCCTGA CCCTCGGCGT GCACACCCGC ATCGACGAGA CCATCGCCAA GGTGATCGAC
AACGTCAACG CCGGTAACGT CTACGTCAAC CGCAACATCG TGGGTGCCGT GGTCGGCGTC
CAGCCATTCG GTGGTGAAGG CCTGTCGGGT ACTGGCCCGA AAGCCGGTGG CCCGCTGTAC
CTGTACCGTC TGCTGTCGAC GCGTCCTACC GATGCCATCG AACAATCCTT CGCTCGCGCT
GATGCTGCCG TGGCGCCGGA CGTTCGTCTG CGCGACGCCA TGAGCAAACC GCTGACCGCT
CTGAAAGCCT GGGCCGACAG CAACAAGTTC GCCGACCTGA GCACCCTGTG CGTGCAGTAC
GCGGCGCAGT CGCAAAGCGG TATCACCCGC GTACTGGCCG GCCCGACCGG CGAGAAGAAC
AGCTACGCGA TCCTGCCGCG CGAGCACGTG CTGTGCCTGG CGGACATCGA AGGTGATCTG
CTGACCCAAC TCGCTGCAGT ACTGGCAGTA GGCGGTTCGG CAGTCTGGCC GGAATCCGAC
ACCAGCAAGG CATTGTTCGC ACGCCTGCCG AAGGAAATTC AGGCGCGAAT CAAACTGGTT
TCCGACTGGA ACAAGGACGA CGTGGTGTTC GACGCGGTTC TGCATCACGG CCATTCCGAC
CAGTTGCGTG CGGTCTGCCA GCAGATCGCC AAGCGTGCCG GCGCCATCGT CGGGGTTCAG
GGCCTGTCCC AGGGCGAGAC CAACATTGCA CTGGAGCGTC TGGTGATCGA GCGTGCGTTG
AGCGTCAACA CCGCGGCAGC AGGCGGCAAC GCCAGTCTGA TGACCATCGG TTAA
 
Protein sequence
MATTTLGVKL DDPTRERLKA AATSIDRTPH WLIKQAIFNY LEKLEGGATL TELNGLTAKD 
ADDAGEVHTD HAHQCFLEFA ESILPQSVLR ASITAAYRRP EPEVVPMLIE QARLPAPMAE
ATNKLAATIA EKLRNQKSAG GRAGIVQGLL QEFSLSSQEG VALMCLAEAL LRIPDKGTRD
ALIRDKISTG NWQPHLGNSP SLFVNAATWG LLLTGKLVST HNEAGLTSSL SRIIGKSGEP
MIRKGVDMAM RLMGEQFVTG ETIAEALANA SKFEAKGFRY SYDMLGEAAL TEHDAQKYLA
SYEQAIHSIG KASHGRGIYE GPGISIKLSA LHPRYSRAQY ERVMDELYPR LLSLTLLAKQ
YDIGLNIDAE EADRLELSLD LLERLCFEPQ LTGWNGIGFV IQAYQKRCPY VIDYVIDLAR
RSRHRLMIRL VKGAYWDSEI KRAQVEGLEG YPVYTRKVYT DVSYIACARK LLSVPEVIYP
QFATHNAHTL SAIYHIAGQN YYPGQYEFQC LHGMGEPLYE QVVGKVSEGK LNRPCRVYAP
VGTHETLLAY LVRRLLENGA NTSFVNRIAD QSVSIQELVA DPVAQIEQMA TVEGGFGLPH
PRIPLPRDLY GSERANSAGI DMANEHRLAS LSCALLATAH NNWKAAPMLG CASSNEAPAP
VLNPSDLRDV VGHVQEATVE DVDNAIQCAL NAAPIWQATP PAERAAILER AADLMEGEIQ
PLMGLLAREA GKTFANAIAE VREAVDFLRY YAVQARNDFS NDAHRPLGPV VCISPWNFPL
AIFSGQVAAA LAAGNPVLAK PAEQTPLVAA QAVRLLLEAG IPEGVLQLLP GRGETVGAGL
VGDERVKGVM FTGSTEVARL LQRNIAGRLD NQGRPIPLIA ETGGQNAMIV DSSALTEQVV
IDVVSSAFDS AGQRCSALRV LCLQEDSADR VIEMLKGAMA ESRLGNPERL SVDIGPVIDA
EAKAGIEKHI QGMRDKGRNV YQVAIADTEE VKRGTFVMPT LIELESFDEL QREIFGPVLH
VVRYKRKEID QLIAQINASG YGLTLGVHTR IDETIAKVID NVNAGNVYVN RNIVGAVVGV
QPFGGEGLSG TGPKAGGPLY LYRLLSTRPT DAIEQSFARA DAAVAPDVRL RDAMSKPLTA
LKAWADSNKF ADLSTLCVQY AAQSQSGITR VLAGPTGEKN SYAILPREHV LCLADIEGDL
LTQLAAVLAV GGSAVWPESD TSKALFARLP KEIQARIKLV SDWNKDDVVF DAVLHHGHSD
QLRAVCQQIA KRAGAIVGVQ GLSQGETNIA LERLVIERAL SVNTAAAGGN ASLMTIG