Gene Pfl01_0428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0428 
Symbol 
ID3712436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp486307 
End bp487539 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content64% 
IMG OID 
ProductFAD dependent oxidoreductase 
Protein accessionYP_346161 
Protein GI77456656 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.25324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.196339 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCCC GTCAGGTCGT GATCATCGGC GCCGGCCCCT CCGGCGCCAT CGCCGCCGCA 
TTGCTCAAGC GCAAGGGACA CGACGTGCTG GTGATCGAGC GTCAGCATTT CCCGAGGTTC
TCCATCGGTG AAAGCCTGCT CTGTCATTGC CTGGATTTCG TCGAGGAAGC CGGCATGCTC
GAGGCGGTGA ATGCCGCCGG GTTCCAGCGC AAGAACGGTG CGGCGTTCGC CTGGGGCGAG
CGCTACAGCG CCTTCGATTT TGGTGACACC TTCACCGCCG GCAAGCCGAC GACCCTGCAG
GTGCAACGCG CCGACTTCGA CAAATTGCTG GCCGATCAGG CCACGTTGCA GGGCGCGGAA
ATCCGCTATG GCGACGCGAT TGTCAGCGTC GATTTCGAAC GTCCGCGACC GCAGTTGAAT
GTGCGCCGCG AAGACGCCAG CGAGTACCGC GTTGAAGCCG ACTTTGTCCT CGATGCCAGC
GGCTACGGCC GCGTGCTGTC GCGCCTGCTC GACCTCGAAG CGCCGTCGAA TTTCCCGGTT
CGCCAGGCGG TCTTCACTCA CGTTGAAGAC CACATTGATT ACCCCGGCTT CGACCGTGAA
AAAATCCTCA TCACCACCCA TCCGCAGCAC CGCGACATCT GGTTCTGGTC GATCCCGTTC
AGCAACGGTC GCTGCTCCGT CGGCGTGGTG GCTGCCGCTG AACATTTCGC AGGTCGCGAT
ACCGACCTCG ACGCCTGCCT GCGCGGGTTC ATCGCCGAAA CCCCGAGCCT GGCCAAAGTG
CTGAACAACG CCGTATGGGA TACCCCGGCG CGCACTCTCG GCGGGTATGC GGCCAACGTC
AAAACCCTGC ACGGCCCGGG CTTCGCGCTG CTGGGCAACG CGGCGGAGTT TCTCGACCCG
GTGTTCTCCT CGGGCGTGAC CATTGCCATG CGTTCGGCGA GCATGGCCGC CGCTGTGCTG
CACCGGCAGT TGCAGGGCGA AACCGTGGAC TGGCAACGGG AGTTCGCCGA GCCGCTGAAA
CGTGGGGTCG ACACCTTCCG CTGCTACGTC GAAGGCTGGT ACGCCGGCAC CTTTCAGGAC
GTGATTTTCC ACGAGCAAGG CTCGCCGGAA ATCCGCCGCA TGATCTGCTC GATCCTCGCC
GGTTACGCAT GGGACGAACG CAACCCGTTC GTCAGTGAAG CGCGCCGTCG GCTGAAGATG
ATCTCCGAAC TCTGTGCAAG GGACGACACA TGA
 
Protein sequence
MESRQVVIIG AGPSGAIAAA LLKRKGHDVL VIERQHFPRF SIGESLLCHC LDFVEEAGML 
EAVNAAGFQR KNGAAFAWGE RYSAFDFGDT FTAGKPTTLQ VQRADFDKLL ADQATLQGAE
IRYGDAIVSV DFERPRPQLN VRREDASEYR VEADFVLDAS GYGRVLSRLL DLEAPSNFPV
RQAVFTHVED HIDYPGFDRE KILITTHPQH RDIWFWSIPF SNGRCSVGVV AAAEHFAGRD
TDLDACLRGF IAETPSLAKV LNNAVWDTPA RTLGGYAANV KTLHGPGFAL LGNAAEFLDP
VFSSGVTIAM RSASMAAAVL HRQLQGETVD WQREFAEPLK RGVDTFRCYV EGWYAGTFQD
VIFHEQGSPE IRRMICSILA GYAWDERNPF VSEARRRLKM ISELCARDDT