| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0425 |
|---|
| Symbol | |
|---|
| ID | 3712472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 483910 |
|---|
| End bp | 485106 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | 3-oxoacyl-(acyl carrier protein) synthase I |
|---|
| Protein accession | YP_346158 |
|---|
| Protein GI | 77456653 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.545614 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.342361 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCT ACCTCAATGC CCTCGGCGTG ATCTGTGCCC TGGGGCGCGA CAAGCAAACC
GTGGCACGCA ACCTGTTTGC CGGCGACTGC TCCGGCATGC GCCGCGAGTC CGGCTGGGTG
CCGGAGCGCG AACTGCCGGT GGCCGCCGTA CACGGCGATC TGGCGCCGAT TCCCGAGGCG
CTGGCCGACC AGCGCAGCCG CAACAATCAA CTGTTGCTGG AAGCCGCGTT GCAGATTCGC
GATGACATCG AGCAGGCGAT CCAGACGTAC GGCCGCGATC GCATCGGCGT GGTGCTCGGC
ACCAGCACTT CCGGTATCGA CGAAGCCAGC CGTGGCCTGG CGCACTACAT TCGTGACCAG
CAGTTCCCGG CCGATTACGA CTACCGGCAA CAGGAACTCG GCGCCCCGGC GAATTTCCTC
GCCGACTGGC TGCAACTGAG CGGCCCGACC TATGTGATTT CCACCGCCTG CACCTCCAGC
GCACGCGCCT TGATGAGCGC CCGGCGCCTG CTCGATCTGG GCCTGTGCGA CGCGGTGCTG
TGTGGCGGTG TCGACAGCCT GTGCAAACTG ACCCTCAACG GTTTCAGTGC GCTGGAAGCG
GTGTCGGACG AGCGCTGCAA TCCGTTTTCC GCCAACCGCA ACGGCATCAA CATCGGCGAA
GCGGCGGTGC TGTTCGTGAT GAGCAAAGAA CGCGGCGCAG GGCCGGGCAT CGCCTTGCTC
GGCGCTGGCG CCAGCTCCGA CGCGCACCAT ATTTCCGCAC CTGAGCCAAC CGGCCGCGGC
GCGCTGCAAG CGATGCAAAA AGCCCTCGAT CAAGCCCACC TGCAAGCCGA CGACATCAGC
TACCTGAACC TGCACGGCAC CGCGACCCAG CACAACGACG CCATGGAAAG CCTGGCCGTT
GACGCGCTGT TTGCCGACGG CGTGCCGTGT TCCTCGACCA AACCGATGAC CGGTCATACC
CTCGGTGCCG CCGGTGCACT GGAAGCAGCC TTCTGCTGGT TGAGCCTGAG TGCCGACAAC
CCCGACCACG CCTTGCCACC GCACATCTGG GACGGCCAGG CCGATCCCGA CCTGCCAGCG
CTGAAGTGGG TGACCGCAAG CGAACGCCTG GCGTCCATTG CACCTCGCTA CCTGATGAGC
AACTCGTTTG CCTTCGGTGG CAATAACGTC AGCCTGATTA TCGGAGACGC CCCATGA
|
|---|
| Protein sequence | MTAYLNALGV ICALGRDKQT VARNLFAGDC SGMRRESGWV PERELPVAAV HGDLAPIPEA
LADQRSRNNQ LLLEAALQIR DDIEQAIQTY GRDRIGVVLG TSTSGIDEAS RGLAHYIRDQ
QFPADYDYRQ QELGAPANFL ADWLQLSGPT YVISTACTSS ARALMSARRL LDLGLCDAVL
CGGVDSLCKL TLNGFSALEA VSDERCNPFS ANRNGINIGE AAVLFVMSKE RGAGPGIALL
GAGASSDAHH ISAPEPTGRG ALQAMQKALD QAHLQADDIS YLNLHGTATQ HNDAMESLAV
DALFADGVPC SSTKPMTGHT LGAAGALEAA FCWLSLSADN PDHALPPHIW DGQADPDLPA
LKWVTASERL ASIAPRYLMS NSFAFGGNNV SLIIGDAP
|
|---|
| |