| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0415 |
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| Symbol | hemE |
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| ID | 3712462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 476414 |
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| End bp | 477481 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_346148 |
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| Protein GI | 77456643 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.218372 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCCC TGAAGAACGA CCGTTTCCTC CGCGCCCTGC TCAAGCAACC CGTAGACGTC
ACCCCAGTGT GGATGATGCG CCAGGCCGGC CGCTACCTGC CGGAATACCG CGCCAGCCGC
GCCCAGGCCG GTGATTTCAT GAGCCTGTGC ATGAATCCGG AATTCGCCTG CGAAGTCACG
CTGCAACCGC TGGACCGCTA TCCGCAACTG GACGCGGCGA TCCTGTTCTC CGACATCCTC
ACCATTCCCG ATGCCATGGG CCAGGGCCTG TACTTCGAGA CCGGTGAAGG TCCGCGCTTC
AAGAAAGTCG TCAGCACCCT GGCCGACATC GAAGCCCTGC CGATCCCGGA TCCGCACAAA
GACCTCGGTT ACGTGATGGA CGCCGTCAGC ACCATCCGCC GCGAACTGAA TGGCCGTGTA
CCGCTGATCG GTTTCTCCGG CAGCCCTTGG ACTCTCGCCA CGTACATGGT CGAAGGCGGT
TCGTCGAAAG ACTTCCGCAA GACCAAGGCG ATGCTCTACG ACAACCCACA AGCCATGCAC
CTGCTGCTGG ACAAACTGGC GCAGTCGGTG ACTTCGTACC TGAACGGCCA GATCCAGGCC
GGTGCGCAAG CGGTGCAGAT CTTCGATACC TGGGGCGGCA ACCTGTCGGC GGCGGCATAT
CAGGAATTCT CACTGGCCTA CATGAAGAAA ATCGTCAGCG GCCTGATCCG CGAGCACGAC
GGTCGCAAGG TGCCGGTGAT CCTGTTCACC AAGAACGGCG GCCTGTGGCT GGAAAGCATC
GCCGAGGCTG GTGCCGACGC ACTGGGCCTG GACTGGACCT GCGACATTGG CAACGCCCGC
GCTCGCGTTG GCGACAAGGT GGCACTGCAA GGCAACATGG ACCCGACCGT GCTCTACGCC
AAGCCGGAAG CGATCCGCAC CGAAGTCGGG CGCATCCTCG CCAGCTACGG CAAAGGCAGC
GGCCACGTGT TCAACCTCGG CCACGGCATC ACGCCGGAAG TCGATCCGGA ACACGCTGGC
GCGTTCCTGC GCGCGGTGCA CGAGTTGTCG GCGCAGTATC ACGAGTGA
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| Protein sequence | MTALKNDRFL RALLKQPVDV TPVWMMRQAG RYLPEYRASR AQAGDFMSLC MNPEFACEVT
LQPLDRYPQL DAAILFSDIL TIPDAMGQGL YFETGEGPRF KKVVSTLADI EALPIPDPHK
DLGYVMDAVS TIRRELNGRV PLIGFSGSPW TLATYMVEGG SSKDFRKTKA MLYDNPQAMH
LLLDKLAQSV TSYLNGQIQA GAQAVQIFDT WGGNLSAAAY QEFSLAYMKK IVSGLIREHD
GRKVPVILFT KNGGLWLESI AEAGADALGL DWTCDIGNAR ARVGDKVALQ GNMDPTVLYA
KPEAIRTEVG RILASYGKGS GHVFNLGHGI TPEVDPEHAG AFLRAVHELS AQYHE
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