Gene Pfl01_0397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0397 
Symbol 
ID3712483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp450655 
End bp451233 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content61% 
IMG OID 
ProductATP-dependent protease peptidase subunit 
Protein accessionYP_346130 
Protein GI255961281 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.848683 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGGGC ATAAGGCATT TTCGCCCCGC AGTGTGGAGA CTCTTCCCTT GACCACCATC 
GTTTCAGTCC GCCGCCACGG CAAAGTCGTC ATGGGCGGCG ACGGCCAGGT TTCTCTCGGC
AATACCGTGA TGAAAGGCAA CGCGAAGAAA GTTCGTCGCC TGTACCACGG CGAAGTCATC
GCCGGGTTCG CCGGTGCCAC CGCCGACGCC TTTACCCTGT TCGAACGTTT CGAAGGCCAG
CTTGAAAAAC ACCAGGGTCA CCTGGTTCGC GCCGCCGTCG AACTCGCCAA AGAATGGCGC
ACCGACCGCT CCCTGAGCCG CCTCGAAGCG ATGCTCGCGG TCGCCAACAA GGACGCATCC
CTGATCATCA CTGGCAACGG TGACGTGGTC GAACCCGAAG ACGGCCTGAT CGCCATGGGT
TCCGGTGGCG CCTATGCGCA AGCCGCCGCC AGCGCGCTGC TGAAAAAGAC CGACCTGTCG
GCCCGCGAAA TCGTCGAGAC CGCTCTCGGC ATCGCCGGCG ACATCTGTGT ATTCACCAAC
CACACCCAGA CCATTGAGGA GCAGGATCTC GCTGAATGA
 
Protein sequence
MNGHKAFSPR SVETLPLTTI VSVRRHGKVV MGGDGQVSLG NTVMKGNAKK VRRLYHGEVI 
AGFAGATADA FTLFERFEGQ LEKHQGHLVR AAVELAKEWR TDRSLSRLEA MLAVANKDAS
LIITGNGDVV EPEDGLIAMG SGGAYAQAAA SALLKKTDLS AREIVETALG IAGDICVFTN
HTQTIEEQDL AE