Gene Pfl01_0380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0380 
Symbol 
ID3712643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp435834 
End bp436628 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content61% 
IMG OID 
ProductSec-independent periplasmic protein translocase 
Protein accessionYP_346113 
Protein GI77456608 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.117601 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGGCC CTAGCCTCCC CGAAAACGAC CAGCACATGC CGCTGGTTTC GCACCTCACC 
GAGTTGCGCA CCCGCCTGCT GCGTTGCGTG GCGGCGATCT TCATCATCTT TGCCGGGCTG
TTTGCCTTCA CCCAGCAGAT CTACACCTTC GTCTCGACGC CGCTGCGCGA ATACCTGCCG
GCCGGCGCGA CGATGATCGC CACCGACGTG TCGTCGCCGT TCCTGACGCC GCTGAAACTG
ACGATGATGG TCTCACTGTT CCTGGCGATT CCGGTGATCC TGCATCAGAT CTGGGGCTTC
ATCGCACCGG GTCTGTACAA GCACGAGAAG CGTGTCGCAG TGCCGTTGCT GATCTCCAGC
ATCCTGCTGT TCTACACCGG CATGGCGTTC GCCTACTTCT TCGTGTTCCC GCTGATCTTC
AAGTTCTTCG CCTCGGCCAC CCCGGCCGGC GTGGAAATGA TGACCGACAT CACCAGTTAC
CTCGATTTCG TCATGACGCT GTTCTTCGCC TTCGGCGTGG CGTTCGAAAT CCCGGTGGCC
GTGGTGCTGC TGGTGTGGAT CGGCGTGGTC GACGTCAAAT ACCTGAAGAA GATCCGTCCG
TACGTGATCA TCGGCTGCTT CGTGGTCGGC ATGATCCTGA CCCCGCCGGA CATCTTCTCC
CAGACCCTGC TGGCCGTGCC GATGTGGATG CTGTTCGAAG TCGGCATCCT CTTCGGCAGT
CTGGTCAGCA AGCGCGAGCG CCCGGAAGAA ACCGCCGACG ATCACAACGA CCAGCCGCCA
GCGACTCAGC CATGA
 
Protein sequence
MTGPSLPEND QHMPLVSHLT ELRTRLLRCV AAIFIIFAGL FAFTQQIYTF VSTPLREYLP 
AGATMIATDV SSPFLTPLKL TMMVSLFLAI PVILHQIWGF IAPGLYKHEK RVAVPLLISS
ILLFYTGMAF AYFFVFPLIF KFFASATPAG VEMMTDITSY LDFVMTLFFA FGVAFEIPVA
VVLLVWIGVV DVKYLKKIRP YVIIGCFVVG MILTPPDIFS QTLLAVPMWM LFEVGILFGS
LVSKRERPEE TADDHNDQPP ATQP