Gene Pfl01_0379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0379 
Symbol 
ID3712642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp435130 
End bp435837 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content66% 
IMG OID 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_346112 
Protein GI77456607 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.744175 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.123252 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGC TGCTGCTCGA AGAGGCCGAC TTCATTGCGG CCGACCGCGT CGTGCTGCGT 
GATCGGCGCC TGACCCACAT GCAGGAAGTC CACCGTTCGG AAGTCGGCGA CAGCCTGCGG
GTCGGGTGCA TTGGCGGGCT GATGGGCTCG GCCGAGCTTT TGCGCCTTGA CGCGGGCGAA
GCCGAGCTGC GAGTCAACCT CGATCAACCG CCACCGGCCA AACTGCCGCT GACCCTGGTG
CTCGCCCTGC CCCGCCCGAA GATGCTGCGC CGGGTGTTCC AGACCGTGGC GACCATGGGC
GTGTCGAAGG TGATTCTGGT CAACAGCTAC CGGGTCGAGA AAAGCTTCTG GCAGACGCCG
TTCCTCGAAC CGGACGCCAT CCGCGAACAA CTGATCCTCG GCCTCGAACA GGCTCGGGAT
ACGGTGCTGC CGGAGATCAT CATCGAGAAG CGCTTCAAGC CGTTCGTCGA AGATCGCCTG
CCGGCCATCA CCGACGGCAC CCTCGGTCTG GTCGGTCATC CGGGCAACTT CCCGCCCTGC
CCCCGCGCCC TGAACGAACC GGTGACCCTG GCCATCGGCC CCGAGGGTGG CTGGATTCCC
TACGAAATCG ATCTGCTGGC CAAGGCCGGG CTGCAACCGG TGCAACTGGG CGAGCGAATC
CTGCGGGTCG AAACCGCCGT CACCGCGCTG CTCGCCCGGC TGTTCTGA
 
Protein sequence
MNLLLLEEAD FIAADRVVLR DRRLTHMQEV HRSEVGDSLR VGCIGGLMGS AELLRLDAGE 
AELRVNLDQP PPAKLPLTLV LALPRPKMLR RVFQTVATMG VSKVILVNSY RVEKSFWQTP
FLEPDAIREQ LILGLEQARD TVLPEIIIEK RFKPFVEDRL PAITDGTLGL VGHPGNFPPC
PRALNEPVTL AIGPEGGWIP YEIDLLAKAG LQPVQLGERI LRVETAVTAL LARLF