Gene Pfl01_0378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0378 
Symbol 
ID3712641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp433106 
End bp435022 
Gene Length1917 bp 
Protein Length638 aa 
Translation table11 
GC content64% 
IMG OID 
Productchemotaxis sensory transducer 
Protein accessionYP_346111 
Protein GI77456606 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.68857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.288543 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCGTT GGTTAGCCGA GAGTCTTGGA AACGTCAGCG TCAAACGTAA GCTTGGAATC 
GGTTTCGGCC TGGTGCTGCT GCTGACCCTG TTGATCACCT TCACCGGCTG GACCGGCATG
AGCGGGATCA TCAGCCGGGG TGACAAGCTC GGGTTCATCT CCAGCCTCAA CGAGCTGACC
AAAGACCTGC GCCTGGCACG CCTGGACTAT GAAGCCCGCC GTGGCGAACA GGGCCCTGGC
GCGGTCAACG ACCTGCTCGG CAAGCTCGAC AGCGGCCTGC AAAGCGCGCG CGGCATGATC
GAGCAACCGT CCGACGTGGC CATGATCGAC CAGCAACTCG CGGCGGTCGC CGAGTACAAA
CGCGCCTTTG CCGACATGAC CCAGGCCACC GTGCAGCGTG AAGACGCCCG CAGCAAACTC
GGCGCCAGCG CCGATAACGC CGTGGCCAAG GTCAGCGAAG TCGAGAAATC CCTGCTGCAA
GGCGACAGCG TTGCGCAATT CAACAGCGTG ATCGAGCTGA GCAAACTGCT GCAGCAGGCG
CGCTATCAGG TGCGCGGCTA CACCTACAGC GGCAAGGCCG AAGCCGAACA ACCGGCGCTG
GATGCCATCG CCGCCGCCCT GAACAATCTG GAAAGCCTGC CGAGCAAACT GCCCGAGCAA
CACATCGCCA ACCTGCAACA GGCCACCGAA TCGCTGAAGG CTTATCGCGC CGCCGTCAGC
CAGTTCCGCG ACTCCCAGGT GAACAACGCG AAGGCCATGG CGCGAATGAC CGCTCAGGGC
GACATCCTGC TCGACGTCAG CAAGAAACTT ACCGAATCTC AGACCATCGT CCGCGACACC
GATGCCGCGC ACGCCAAAAA CATGCTGATG ATCGCCACCC TGCTGGCCCT GGCCTTCGGT
CTGCTGGCGG CCTGGGCGAT CACCCGGCAG ATCATCATTC CGCTGGAGCA AACCCTGAAA
GTCGCCGAGC GCGTGGCCGC CGGTGACCTG ACCCACAATC TGGTATCCCT GCGCCGCGAT
GAACTTGGTC AACTGCAACG CTCGATGCAG AGCATGACTC AGGGCCTGCG CGAATTGATC
GGCGGCATCA GCGACGGCGT GACCCAGATC GCCAGCGCCG CCGAAGAATT GTCCGCCGTG
ACCGAGCAGA CCAGCGCCGG GGTCAACAAT CAGAAAATCG AGACCGACCA GGTCGCCACC
GCCATGAACG AAATGGCCGC CACCGTGCAG GAAGTCGCGC GCAACGCCGA GGAAGCTTCG
GAAGCCGCGG TCGCTGCTGA TCAGCAGGCC CGTGAAGGCG ACAAGGTGGT TGGCGAGGCG
ATCGCCCAGA TCGAACGTCT GGCTGCCGAA GTCGGCCACT CCACCGAGGC CATGGGCGAG
CTCAAGCGCG AGAGCGACAA GATCGGCAGC GTGCTCGACG TGATCAAGTC CGTGGCTCAG
CAAACCAACC TGCTGGCCCT CAACGCCGCC ATCGAGGCCG CCCGTGCCGG TGAAGCCGGA
CGTGGTTTTG CGGTGGTCGC CGACGAAGTT CGCAGCCTCG CCCAGCGCAC CCAGAAGTCC
ACCGAAGAGA TCGAAGAGCT GATCGTCGGA CTGCAGAACG GCACCCAGCA AGTGGCAACG
ATCATGGACA ACAGCCGCAC CCTGACCGAC AGCAGCGTCG AGCTGACCCG GCGTGCCGGT
GGTTCGCTGG AAAGCATCAC CCGCACCGTT TCGGCGATTC AGGCGATGAA CCAGCAGATC
GCTGCGGCGG CCGAGCAGCA GAGCGCTGTG GCTGAAGAGA TCAACCGCAG CGTGCTGAAC
GTGCGGGATG TCTCGGACCA GACCTCGGCG GCCAGTGAAG AGACAGCGGC CTCCAGCGTC
GAGCTGGCGC GTTTGGGCAC CCACCTGCAA ACACTGGTGG GCCGGTTCAA GGTGTAA
 
Protein sequence
MYRWLAESLG NVSVKRKLGI GFGLVLLLTL LITFTGWTGM SGIISRGDKL GFISSLNELT 
KDLRLARLDY EARRGEQGPG AVNDLLGKLD SGLQSARGMI EQPSDVAMID QQLAAVAEYK
RAFADMTQAT VQREDARSKL GASADNAVAK VSEVEKSLLQ GDSVAQFNSV IELSKLLQQA
RYQVRGYTYS GKAEAEQPAL DAIAAALNNL ESLPSKLPEQ HIANLQQATE SLKAYRAAVS
QFRDSQVNNA KAMARMTAQG DILLDVSKKL TESQTIVRDT DAAHAKNMLM IATLLALAFG
LLAAWAITRQ IIIPLEQTLK VAERVAAGDL THNLVSLRRD ELGQLQRSMQ SMTQGLRELI
GGISDGVTQI ASAAEELSAV TEQTSAGVNN QKIETDQVAT AMNEMAATVQ EVARNAEEAS
EAAVAADQQA REGDKVVGEA IAQIERLAAE VGHSTEAMGE LKRESDKIGS VLDVIKSVAQ
QTNLLALNAA IEAARAGEAG RGFAVVADEV RSLAQRTQKS TEEIEELIVG LQNGTQQVAT
IMDNSRTLTD SSVELTRRAG GSLESITRTV SAIQAMNQQI AAAAEQQSAV AEEINRSVLN
VRDVSDQTSA ASEETAASSV ELARLGTHLQ TLVGRFKV