Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0378 |
Symbol | |
ID | 3712641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 433106 |
End bp | 435022 |
Gene Length | 1917 bp |
Protein Length | 638 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | chemotaxis sensory transducer |
Protein accession | YP_346111 |
Protein GI | 77456606 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.68857 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.288543 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACCGTT GGTTAGCCGA GAGTCTTGGA AACGTCAGCG TCAAACGTAA GCTTGGAATC GGTTTCGGCC TGGTGCTGCT GCTGACCCTG TTGATCACCT TCACCGGCTG GACCGGCATG AGCGGGATCA TCAGCCGGGG TGACAAGCTC GGGTTCATCT CCAGCCTCAA CGAGCTGACC AAAGACCTGC GCCTGGCACG CCTGGACTAT GAAGCCCGCC GTGGCGAACA GGGCCCTGGC GCGGTCAACG ACCTGCTCGG CAAGCTCGAC AGCGGCCTGC AAAGCGCGCG CGGCATGATC GAGCAACCGT CCGACGTGGC CATGATCGAC CAGCAACTCG CGGCGGTCGC CGAGTACAAA CGCGCCTTTG CCGACATGAC CCAGGCCACC GTGCAGCGTG AAGACGCCCG CAGCAAACTC GGCGCCAGCG CCGATAACGC CGTGGCCAAG GTCAGCGAAG TCGAGAAATC CCTGCTGCAA GGCGACAGCG TTGCGCAATT CAACAGCGTG ATCGAGCTGA GCAAACTGCT GCAGCAGGCG CGCTATCAGG TGCGCGGCTA CACCTACAGC GGCAAGGCCG AAGCCGAACA ACCGGCGCTG GATGCCATCG CCGCCGCCCT GAACAATCTG GAAAGCCTGC CGAGCAAACT GCCCGAGCAA CACATCGCCA ACCTGCAACA GGCCACCGAA TCGCTGAAGG CTTATCGCGC CGCCGTCAGC CAGTTCCGCG ACTCCCAGGT GAACAACGCG AAGGCCATGG CGCGAATGAC CGCTCAGGGC GACATCCTGC TCGACGTCAG CAAGAAACTT ACCGAATCTC AGACCATCGT CCGCGACACC GATGCCGCGC ACGCCAAAAA CATGCTGATG ATCGCCACCC TGCTGGCCCT GGCCTTCGGT CTGCTGGCGG CCTGGGCGAT CACCCGGCAG ATCATCATTC CGCTGGAGCA AACCCTGAAA GTCGCCGAGC GCGTGGCCGC CGGTGACCTG ACCCACAATC TGGTATCCCT GCGCCGCGAT GAACTTGGTC AACTGCAACG CTCGATGCAG AGCATGACTC AGGGCCTGCG CGAATTGATC GGCGGCATCA GCGACGGCGT GACCCAGATC GCCAGCGCCG CCGAAGAATT GTCCGCCGTG ACCGAGCAGA CCAGCGCCGG GGTCAACAAT CAGAAAATCG AGACCGACCA GGTCGCCACC GCCATGAACG AAATGGCCGC CACCGTGCAG GAAGTCGCGC GCAACGCCGA GGAAGCTTCG GAAGCCGCGG TCGCTGCTGA TCAGCAGGCC CGTGAAGGCG ACAAGGTGGT TGGCGAGGCG ATCGCCCAGA TCGAACGTCT GGCTGCCGAA GTCGGCCACT CCACCGAGGC CATGGGCGAG CTCAAGCGCG AGAGCGACAA GATCGGCAGC GTGCTCGACG TGATCAAGTC CGTGGCTCAG CAAACCAACC TGCTGGCCCT CAACGCCGCC ATCGAGGCCG CCCGTGCCGG TGAAGCCGGA CGTGGTTTTG CGGTGGTCGC CGACGAAGTT CGCAGCCTCG CCCAGCGCAC CCAGAAGTCC ACCGAAGAGA TCGAAGAGCT GATCGTCGGA CTGCAGAACG GCACCCAGCA AGTGGCAACG ATCATGGACA ACAGCCGCAC CCTGACCGAC AGCAGCGTCG AGCTGACCCG GCGTGCCGGT GGTTCGCTGG AAAGCATCAC CCGCACCGTT TCGGCGATTC AGGCGATGAA CCAGCAGATC GCTGCGGCGG CCGAGCAGCA GAGCGCTGTG GCTGAAGAGA TCAACCGCAG CGTGCTGAAC GTGCGGGATG TCTCGGACCA GACCTCGGCG GCCAGTGAAG AGACAGCGGC CTCCAGCGTC GAGCTGGCGC GTTTGGGCAC CCACCTGCAA ACACTGGTGG GCCGGTTCAA GGTGTAA
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Protein sequence | MYRWLAESLG NVSVKRKLGI GFGLVLLLTL LITFTGWTGM SGIISRGDKL GFISSLNELT KDLRLARLDY EARRGEQGPG AVNDLLGKLD SGLQSARGMI EQPSDVAMID QQLAAVAEYK RAFADMTQAT VQREDARSKL GASADNAVAK VSEVEKSLLQ GDSVAQFNSV IELSKLLQQA RYQVRGYTYS GKAEAEQPAL DAIAAALNNL ESLPSKLPEQ HIANLQQATE SLKAYRAAVS QFRDSQVNNA KAMARMTAQG DILLDVSKKL TESQTIVRDT DAAHAKNMLM IATLLALAFG LLAAWAITRQ IIIPLEQTLK VAERVAAGDL THNLVSLRRD ELGQLQRSMQ SMTQGLRELI GGISDGVTQI ASAAEELSAV TEQTSAGVNN QKIETDQVAT AMNEMAATVQ EVARNAEEAS EAAVAADQQA REGDKVVGEA IAQIERLAAE VGHSTEAMGE LKRESDKIGS VLDVIKSVAQ QTNLLALNAA IEAARAGEAG RGFAVVADEV RSLAQRTQKS TEEIEELIVG LQNGTQQVAT IMDNSRTLTD SSVELTRRAG GSLESITRTV SAIQAMNQQI AAAAEQQSAV AEEINRSVLN VRDVSDQTSA ASEETAASSV ELARLGTHLQ TLVGRFKV
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