Gene Pfl01_0369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0369 
Symbol 
ID3713417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp421913 
End bp422929 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content61% 
IMG OID 
Productsubstrate-binding region of ABC-type glycine betaine transport system 
Protein accessionYP_346102 
Protein GI77456597 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.341671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCGAC CACGGTGCAA GAAGACACCG ATCCGAACAA TAATCCGCTG CCGCACGAGA 
CGATCCCTCA TGAAAAAACT GTTCACTCGT TGTGCGTTAA TCCTCACCGG CAGTGCGCTG
CTCAGCGCCG GCGCCATGGC CTCCGACGAT GCCTCCTGCA AAACCGTGCG CATGGGCGTG
GTCAACTGGA CCGACGTGAT CGCCACCAGC GGCATGGCCG ACGTGCTGCT CAACGGCCTC
GGCTACGAAA GCAAGCAGAC CAGCGCCGTG CAGCAAATCA TCTTCGCCGG CATCCGCGAC
AAGCGCCTCG ATATCTTCCT CGGCTACTGG AAACCGGCGA TGGACAAGAA CATCGCGCCG
TTCCTCGCCG CCAATCAGGT CAAGGTCATG GACAAGCCCA GCCTGGCCGA CGCCCAGGCG
ACCCTGGCGG TTCCGGACTA TGTGGCGGCG GCAGGGCTGA AGACCTTTGG CGACATCGCG
AAATTCAAGG ATCAGCTAGG TGGCAAAATC TACGGCATCG AGCCCGGCAG CGGCGCCAAC
ACCACGATCA AGACGATGAT CGAAACCAAC CATTTCGGCC TGAAGGATTT CAAGATCATC
GAATCCGGTG AGGCCGGCAT GCTCGCCGCC GTGCAGCGAG CGGTGAACCG CAAGGAATTC
GTGGTGTTCG TCGGCTGGAC CCCGCACCCG ATGAACATCA ACATGAAAAT CACCTACCTG
ACCGGCAGCG AAGACGTCTA CGGCCCGAAC GAAGGCGCCG CCACCGTGTC CACCGTCACC
GCGCCGGACT ACGCCGAGCG CTGCCCGAAC GTCCATCGTC TGCTGGAAAA CCTGACCTTC
ACCGCCGCCC AGGAAAGCCA GTTGATGGTG CCGATCATGG AGCGCAAGAC ACCACAGGAA
GTGGCGAAAA CCTGGCTGCG CGAGCATCCC GAAGACCTGC AACGCTGGCT GGCGGGTGTC
AGCAGTTTCG ATGGCAAGGA CGGCGTGGCC ACGGTTCAGG CCAGCCTGAA AAACTGA
 
Protein sequence
MFRPRCKKTP IRTIIRCRTR RSLMKKLFTR CALILTGSAL LSAGAMASDD ASCKTVRMGV 
VNWTDVIATS GMADVLLNGL GYESKQTSAV QQIIFAGIRD KRLDIFLGYW KPAMDKNIAP
FLAANQVKVM DKPSLADAQA TLAVPDYVAA AGLKTFGDIA KFKDQLGGKI YGIEPGSGAN
TTIKTMIETN HFGLKDFKII ESGEAGMLAA VQRAVNRKEF VVFVGWTPHP MNINMKITYL
TGSEDVYGPN EGAATVSTVT APDYAERCPN VHRLLENLTF TAAQESQLMV PIMERKTPQE
VAKTWLREHP EDLQRWLAGV SSFDGKDGVA TVQASLKN