Gene Pfl01_0360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0360 
Symbol 
ID3713408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp410209 
End bp411891 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content64% 
IMG OID 
Producturocanate hydratase 
Protein accessionYP_346093 
Protein GI77456588 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGACA ATAAGCCTAC TAAGTTTCGT AATGTTGAGA TCCGTGCCGC CCGCGGTAAC 
AAGCTGACCG CCAAGAGCTG GCTGACCGAA GCGCCGCTGC GCATGCTGAT GAACAACCTC
GACCCGGAAG TCGCCGAGAA CCCGAAAGAG CTGGTGGTCT ATGGTGGCAT CGGCCGCGCG
GCGCGTAACT GGGAGTGCTA CGACAAGATC GTCGAGAGCC TGACCAACCT CAACGAAGAC
GAAACCCTGC TGGTGCAATC GGGCAAGCCG GTCGGCGTGT TCAAGACCCA CAGCAACGCC
CCGCGCGTAC TGATCGCCAA CTCCAACCTG GTGCCGCACT GGGCGACCTG GGAACACTTC
AACGAACTCG ACGCCAAAGG CCTGGCCATG TACGGCCAGA TGACCGCCGG CAGCTGGATC
TACATCGGCA GCCAGGGCAT CGTCCAGGGC ACCTACGAAA CCTTCGTTGA AGCCGGTCGC
CAGCACTACA ACGACAACCT CACCGGCAAA TGGGTACTGA CCGCCGGCCT CGGCGGCATG
GGCGGCGCCC AGCCACTGGC CGCGACCCTC GCCGGTGCCT GCTCGCTGAA CATCGAATGC
CAGCAGATCA GCATCGATTT CCGCCTCAAG ACCCGCTACG TCGACGAGCA GGCCAAGGAC
CTTGACGACG CGCTGGCCCG CATCGCCAAA TACACCTCCG AAGGCAAGGC GGTTTCCATC
GCCCTGTGCG GCAACGCCGC TGAAATCCTC CCGGAGCTGG TCAAGCGCGG CGTGCGCCCG
GACATGGTCA CCGACCAGAC CAGCGCCCAT GACCCGCTCA ACGGTTATCT GCCGGCCGGC
TGGACCTGGG ACGAATACCG CGCCCGCGCC AAGACCGAGC CAGCCGCTGT GGTCAAGGCC
GCCAAGCAAT CGATGGCCGT GCACGTCAAA GCCATGCTCG ACTTCCAGAA GATGGGCGTG
CCGACCTTCG ACTACGGCAA CAACATCCGT CAGATGGCTC AGGAAGAAGG CGTCGAAAAC
GCATTCGATT TCCCGGGCTT CGTACCGGCC TACATCCGTC CGCTGTTCTG CCGTGGCATC
GGCCCGTTCC GCTGGGCTGC ACTGTCGGGT GATCCGCAGG ACATCTACAA GACCGACGCC
AAAGTCAAAG AACTGATCCC GGACGACGCC CACCTGCACA ACTGGCTGGA CATGGCCCGC
GAGCGCATCA GCTTCCAGGG TCTGCCGGCG CGTATCTGCT GGGTCGGCCT GGGCCTGCGC
GCCAAGCTCG GTCTGGCGTT CAACGAAATG GTCCGCAGCG GCGAGCTGTC GGCTCCGATC
GTGATCGGTC GCGACCACCT CGACTCCGGC TCCGTATCCA GCCCGAACCG TGAAACCGAA
TCCATGCAGG ACGGCTCCGA CGCAGTCTCC GACTGGCCGC TGCTGAATGC CCTGCTGAAC
ACCGCGAGCG GTGCGACCTG GGTGTCTCTG CACCACGGCG GCGGCGTCGG CATGGGCTTC
TCCCAGCACT CGGGCATGGT GATTGTCTGC GACGGTACCG ACGAAGCGGC CGAGCGTATC
GCTCGCGTGC TGCACAACGA CCCGGGCACC GGTGTCATGC GTCACGCCGA TGCCGGTTAC
CAGATCGCCA TCGACTGCGC CAAGGAACAA GGGCTGAACC TGCCGATGAT CACCGGCAAG
TGA
 
Protein sequence
MTDNKPTKFR NVEIRAARGN KLTAKSWLTE APLRMLMNNL DPEVAENPKE LVVYGGIGRA 
ARNWECYDKI VESLTNLNED ETLLVQSGKP VGVFKTHSNA PRVLIANSNL VPHWATWEHF
NELDAKGLAM YGQMTAGSWI YIGSQGIVQG TYETFVEAGR QHYNDNLTGK WVLTAGLGGM
GGAQPLAATL AGACSLNIEC QQISIDFRLK TRYVDEQAKD LDDALARIAK YTSEGKAVSI
ALCGNAAEIL PELVKRGVRP DMVTDQTSAH DPLNGYLPAG WTWDEYRARA KTEPAAVVKA
AKQSMAVHVK AMLDFQKMGV PTFDYGNNIR QMAQEEGVEN AFDFPGFVPA YIRPLFCRGI
GPFRWAALSG DPQDIYKTDA KVKELIPDDA HLHNWLDMAR ERISFQGLPA RICWVGLGLR
AKLGLAFNEM VRSGELSAPI VIGRDHLDSG SVSSPNRETE SMQDGSDAVS DWPLLNALLN
TASGATWVSL HHGGGVGMGF SQHSGMVIVC DGTDEAAERI ARVLHNDPGT GVMRHADAGY
QIAIDCAKEQ GLNLPMITGK