Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0358 |
Symbol | |
ID | 3713406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 408472 |
End bp | 409221 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | histidine utilization repressor |
Protein accession | YP_346091 |
Protein GI | 77456586 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.824022 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCGACTC CGCCTCCAGT CTCCCCGTTG GCCGCGAACA TGGGCGACAG TCCGGCGCCC TTGTACGCCC GCGTCAAACA GATGATCACC CAGCAGATCG ACAGCGGTAA CTGGCCGCCG CATTACCGCG TGCCGTCGGA AAGCGAGCTG GTCAGCCAGC TGGGTTTCAG CCGCATGACC ATCAACCGCG CGTTGCGGGA AATGACCGCC GACGGTCTGC TGGTGCGTAT GCAAGGCGTC GGCACTTTCG TTGCTGAGCC GAAGAGCCAG TCCGCGCTGT TCGAAGTGCA CAACATCGCC GACGAAATCG CCTCCCGTGG CCATCGCCAC ACTTGCCAGG TGATCACCCT GGAAGAAGAG GCTGCCGGTT CCGAGCGCGC GCTGGCGCTG GACATGCGCG AAGGGCAGAA GGTCTTTCAC TCGCTGATCG TGCACTACGA AAACGATGTT CCGGTGCAAA TCGAAGACCG TTTCGTCAAT GCGCTGGTCG CCCCGGAATA CCTCAAGCAG GACTTCACCC TGCAAACGCC TTACGCCTAT CTGAACCAGG TCGCGCCGCT GACCGAAGGC GAGCACGTGG TCGAAGCGAT CCTTGCCGAA GCGTCCGAAT GCAAATTGCT GCAGATCGAA AAAGGCGAGC CTTGCCTTTT GATCCGTCGT CGTACCTGGT CGGGTCGTCA GCCGGTGACG GCGGCGCGCC TGATCCACCC CGGTTCCCGT CATCGTCTGG AAGGTCGGTT TCATAAATGA
|
Protein sequence | MPTPPPVSPL AANMGDSPAP LYARVKQMIT QQIDSGNWPP HYRVPSESEL VSQLGFSRMT INRALREMTA DGLLVRMQGV GTFVAEPKSQ SALFEVHNIA DEIASRGHRH TCQVITLEEE AAGSERALAL DMREGQKVFH SLIVHYENDV PVQIEDRFVN ALVAPEYLKQ DFTLQTPYAY LNQVAPLTEG EHVVEAILAE ASECKLLQIE KGEPCLLIRR RTWSGRQPVT AARLIHPGSR HRLEGRFHK
|
| |