Gene Pfl01_0350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0350 
Symbol 
ID3713398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp396859 
End bp400455 
Gene Length3597 bp 
Protein Length1198 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_346083 
Protein GI77456578 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATGGA TGTTCATGTT GATCGGGCTG CTGCTCGGCT GGCTGCTCGA CGAGTCGTTC 
AGCGATGCGC TGTTGGGCGC CTTGCTCGGG CTCGCCATTG GCCAGGCGAT GCTTATCGCG
CGGCTCGGTT CACAGGCTGC CGAGCAACAG CGTCAGCTGG ATCACGCGAA GATTGCGTTG
CAGGGCGTCG AACAGCGTCT GTTTCTGCTG GAAGGCGCTC CGGCGCATTC GCCAGCGTCG
CCGAGCGTCG CGCCGGTCAG CGAAACGATC GTTGAACCCG TCACGGTATT TGAACAACCC
GCTGCCGCAG AACCCGAGCT GGTCTGGGAA CTGCCTCCCG AGCTCGAACC TGTTGCTGTC
GCCGCCAGCG CATCCAGCCA GCCGCTGCCG GTCGATGTCT GGCGTCTGGA CGCCGTTACG
CCCGAGCCTG AACCCCGACA ACCCGCCGAA CCCCGTGGCC CGAACCTCAT CGAGCGCGGC
ATCAGCGCTG CGCGCAACTG GCTGTTCGGT GGCAACACCG TGCTGCGGGT CGGCGTGGTG
TTGTTGTTTT TCGGTCTGGC GTTCCTGCTG CGCTACGCCA CCGAAGGCAT GGTGGTGCCG
ATCGAATTGC GTTACGCCGG AGTTGCGGCG GCAGCACTGG GCTTGCTGGC GCTGGGCTGG
TGGTTGCGCC ATCGCAACAA CAGCTACGCC TTGATGCTGC AAGGCACCGG GATCGCAGTG
CTGTACCTGA CGGTGTTTGC GGCGATGCGT CTGCATCCGC TGCTCGATCC GTCTGCCGCG
CTGGGATTGC TGGTGGCAGT GACGGTGTTT TCGGCCATTC TGGCCATCAC CCAGGATTCC
CTCGCTCTAG CCTGCGTCGC CGCACTGGGC GGTTTCGCCG CGCCGATTCT GACCTCCACC
GGCGCCGGCA ACCACGTCGC GCTATTCAGT TATTTCGCGC TGCTCAACGC CGGCATTCTG
GCCATCGCCT GGTTCAAGGC CTGGCGCCTG CTCAACCTGA TCGGCTTCGT TGGGACCTTC
GGCATCGGTT TCGCCTGGGG CCTGCGTTCG TACACGCCGG AACTGCTGTG GAGCACCGAA
CCGTTCCTGA TTCTGTTCTT CCTGATGTAC CTGGCCATCG GCCTGCTGTT CGCCCGACGC
AAGTTGCTGG ACATGCCGGA CGCCCCGGCG GACGACGATC GCGAGGCGCT GCTGCACTGG
TCGGCGCGCA AGGGCGATTA CGTCGACGGG ACGATGCTGT TCGGCCCGCC GCTGGTGGGT
TTCGGCCTGC AATTCGCGCT GGTGCAGCAT CTGGAATTCG CTGCCGCGTT CAGTGCGCTG
GCGCTGGGCA TGATCTACAT GGCCCTGGCC AAAGTGCTGA TGGGCGGCCG GGCGTTGTTG
CTGGGTGAGA CTTGCCTGGC GCTTGGGGTG ATTTTCGCCA GCCTGGCGAT TCCGCTGGGG
CTGGATGCAC GCTGGACATC TGCCGCGTGG GCGGTGGAGG GTGCGGGGAT TTTCTGGCTG
GGCTTGCGCC AGCAACGGCC GTTGGCCCGG GCTTTCGCAT TGCTGTTGCA ACTGGGTTCG
GCGCTGGCGT TTCTCAGCCA GTTGCGCGTC GGCGAAAGCA GCCTGCTCGA CGGAGCGCCT
CTGGGCGCAT TGATGCTCGG CGCGGCGTTG CTGTTCAGCT TCTATCAATT GCGCAAGGCG
TCGCCGGAGC AAACTTCACC TTGGGAGCGT CAGGGTTTGC CGGTGCTGGC GTGCCTGGGG
CTGACCTTCC TGTATCTGCT GGCGTCGCTG TTCTTCTTCA TTCAGGGCAC GGCGATCAGT
TGGGCATTGG CCGGGCTGGC GACCTTGTTC GTCGGCTTGC GCCTGCAATC GCGCACGTTC
CTGTTCACCG CGTTTGCCGT GCAGTTGCTT GGCGGGGCGT TATTCCTGTT GCGCCTGCAA
GGGGCGGGCG AGGATTCGGC GGCCGTGTTC AGCGCCGGCT GGAGCGGTCT GCTCAGCGCC
TCGCTGATCG GTCTGGCGCT GATCGCCGGC ATGCTGCTGG CGGCGCGTGA CGAGATGGTG
CGCAGCGATG TGCGGCTGCT GCGCGGTTTG TCGGTGGTGC TGCTGGCGGG GCTGGTACTG
ATCAATCTGG CGGTGTTGTT CGTGCTGCCG TGGCAAACCG CGAGTGCCGT TTGGGCGGCC
AGTGGCTTGC TGATCATCTG GCTCAGTCTG TACCTCAAGC AGCGCGTGAG TTTTGTGTTC
GGTCTGCTGT TGCAACTGAT CGGCGGCGCG GCGTTTCTGC TCGCCGGTCC CGAGCTGCTC
GGGCTGCTGT CCAGCGAGGG GCTGCGACCG CTGGCCCATG GCGGATTCTG GACGCCACTG
GTGCTGGGCC TGGCGGCGAT GATCGGAGCG TGGCGCCTGC AACTTGGCAA TCATGCCTCG
GCGTTCGATG TGCTGAGTCT GCAGCGACTT TCGGAAGTGT TGCTGGTGTG GGGCGCCGGT
TGGTGGGCGC TGGCGTGGGT CAGCGAAGTG CTGCGGTTTG CGCCGCAGAA TCTCCAGGCG
ACGCTGTTGC TGCTGGTGGC CGCGCTGAGC GTCGCGTTGT GGACGTTGTT GGCCTTGCGT
CTGAAATGGC CTTCGCTCGG GTTGCTCTGC ACCGTGCTGA TTCCGGCGGC CGGACTTGTG
TTGCTCGGCG CGTGGCACTC GCGTTATCAC CCGGCGGCGG ATTTCGGCTG GCTGGTGTGG
GCGGCGGTGT TCGTTGTGCA TTTCATCAGC CTGCGACGTC TGGCACCGAT GCTGCCGGCG
CGGGCCTTGA GCACGGCGCA TGTGCTCGGT TGCTGGCTGC TGATCGGCGT GCTGGCGCTG
GAATTGCGCT ACGGCCTGCT GCTGTTGTCC GAGCAATACA ACGCCTGGCG CTGGCTGGGC
TGGGCGATTC TGCCGAGTTT GTATCTGTTG CTGATGGCCG CACCGCGTCA GTGGCCATGG
CCGGTGGCAG CGTTCCCTCG TGAATATCGC CTGTACGCGG CGGCGCCGCT GGCGGTGTTG
ATGCTGGTCT GGTTCTGGCT GGCCAATGGC GTCAGCGATG GCAATGCCGA ACCGTTGCCT
TATGTGCCGC TGCTCAACCC GCTGGAGTTG GGTCTGCTGT TTGCGCTGTT CGGTGTTTAC
GTCTGGTCGC GCAGCGCCGT AGCCGAGCTG TCGATCCGCC AGGATTACGC GGCATACGCT
ACGCAACTGA TTGCCGGCGT TTCGCTGTTC GCGTTCTGCA CTGCGCTGGT GACCCGCGCC
GCGCACCATT GGGCGGGGAT TCCGTTCGAA CTCGATCTGC TGCTCGAATC GATGCTGGTG
CAGGCCGGTC TGTCCATCGT CTGGACGCTG ATGGCGCTGG GTCTGATGAT CGGCGGGCAC
CTGCGTCATC GCCGCGAAGT GTGGCTGATC GGCGCGGCGC TGATTGCGCT GGTGGTGGCC
AAACTGATTT TTGTCGAATT GAGCAACCGT GGCGGACTGG CCCGGATCGT CTCGTTCATC
GGCGTCGGCG TTTTGTTGCT GGTGGTGGGC TACTTTGCGC CGCTGCCGCC CAAACGCGTT
GACGCTGCAC CGGCGGCGGA CAAACCGGCC CCGGAAACCG AAGGAGTGTC GTCTTGA
 
Protein sequence
MQWMFMLIGL LLGWLLDESF SDALLGALLG LAIGQAMLIA RLGSQAAEQQ RQLDHAKIAL 
QGVEQRLFLL EGAPAHSPAS PSVAPVSETI VEPVTVFEQP AAAEPELVWE LPPELEPVAV
AASASSQPLP VDVWRLDAVT PEPEPRQPAE PRGPNLIERG ISAARNWLFG GNTVLRVGVV
LLFFGLAFLL RYATEGMVVP IELRYAGVAA AALGLLALGW WLRHRNNSYA LMLQGTGIAV
LYLTVFAAMR LHPLLDPSAA LGLLVAVTVF SAILAITQDS LALACVAALG GFAAPILTST
GAGNHVALFS YFALLNAGIL AIAWFKAWRL LNLIGFVGTF GIGFAWGLRS YTPELLWSTE
PFLILFFLMY LAIGLLFARR KLLDMPDAPA DDDREALLHW SARKGDYVDG TMLFGPPLVG
FGLQFALVQH LEFAAAFSAL ALGMIYMALA KVLMGGRALL LGETCLALGV IFASLAIPLG
LDARWTSAAW AVEGAGIFWL GLRQQRPLAR AFALLLQLGS ALAFLSQLRV GESSLLDGAP
LGALMLGAAL LFSFYQLRKA SPEQTSPWER QGLPVLACLG LTFLYLLASL FFFIQGTAIS
WALAGLATLF VGLRLQSRTF LFTAFAVQLL GGALFLLRLQ GAGEDSAAVF SAGWSGLLSA
SLIGLALIAG MLLAARDEMV RSDVRLLRGL SVVLLAGLVL INLAVLFVLP WQTASAVWAA
SGLLIIWLSL YLKQRVSFVF GLLLQLIGGA AFLLAGPELL GLLSSEGLRP LAHGGFWTPL
VLGLAAMIGA WRLQLGNHAS AFDVLSLQRL SEVLLVWGAG WWALAWVSEV LRFAPQNLQA
TLLLLVAALS VALWTLLALR LKWPSLGLLC TVLIPAAGLV LLGAWHSRYH PAADFGWLVW
AAVFVVHFIS LRRLAPMLPA RALSTAHVLG CWLLIGVLAL ELRYGLLLLS EQYNAWRWLG
WAILPSLYLL LMAAPRQWPW PVAAFPREYR LYAAAPLAVL MLVWFWLANG VSDGNAEPLP
YVPLLNPLEL GLLFALFGVY VWSRSAVAEL SIRQDYAAYA TQLIAGVSLF AFCTALVTRA
AHHWAGIPFE LDLLLESMLV QAGLSIVWTL MALGLMIGGH LRHRREVWLI GAALIALVVA
KLIFVELSNR GGLARIVSFI GVGVLLLVVG YFAPLPPKRV DAAPAADKPA PETEGVSS