Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0309 |
Symbol | |
ID | 3713200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 355559 |
End bp | 356248 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | amino acid ABC transporter permease |
Protein accession | YP_346042 |
Protein GI | 77456537 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00000829605 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.760188 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTGGG AAGTCATCAT CAAGTGGCTG CCGAAACTGG CCCAGGGCGC AACGCTGACC CTGGAACTGG TGGCCATCGC CGTGATCGCC GGTTTGCTGC TGGCAATTCC GCTGGGCATC GCCCGCTCTT CGAAGCTGTG GTACGTGCGC GCTTTGCCCT ACGCCTATAT CTTCTTTTTC CGTGGCACGC CGTTGCTGGT TCAACTGTTC CTGGTCTACT ACGGCCTGGC GCAGTTCGAT GCGGTGCGTA ACAGTTCGAT GTGGCCGTAC CTGCGCGATC CGTTCTGGTG CGCCACCGCG ACCATGACCC TGCACACCGC GGCGTACATC GCCGAGATCC TGCGCGGGGC GATCCAGGCG ATTCCGCCGG GCGAGATCGA AGCGGCGCGG GCGCTGGGCA TGTCCCGACC GAAAGCGCTG TTCTACATCA TCCTGCCGCG TGCCGCGCGT ATCGGCCTGC CGGCCTACAG CAACGAAGTG ATCCTGATGC TCAAGGCCAG TGCCCTGGCC AGCACCGTGA CCCTGCTGGA ACTGACCGGC ATGGCGCGCA CGATCATTGC CCGCACTTAC CTGCCGGTGG AGATCTTCTT CGCCGCCGGC GTGTTCTATC TGGTGATGGC TTACGTGCTG GTTCGCGGCT TCAAACTGCT GGAACGCTGG CTGCGCGTCG ATGCGTGCCA GGGACGCTGA
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Protein sequence | MNWEVIIKWL PKLAQGATLT LELVAIAVIA GLLLAIPLGI ARSSKLWYVR ALPYAYIFFF RGTPLLVQLF LVYYGLAQFD AVRNSSMWPY LRDPFWCATA TMTLHTAAYI AEILRGAIQA IPPGEIEAAR ALGMSRPKAL FYIILPRAAR IGLPAYSNEV ILMLKASALA STVTLLELTG MARTIIARTY LPVEIFFAAG VFYLVMAYVL VRGFKLLERW LRVDACQGR
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