Gene Pfl01_0309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0309 
Symbol 
ID3713200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp355559 
End bp356248 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content63% 
IMG OID 
Productamino acid ABC transporter permease 
Protein accessionYP_346042 
Protein GI77456537 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000829605 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.760188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTGGG AAGTCATCAT CAAGTGGCTG CCGAAACTGG CCCAGGGCGC AACGCTGACC 
CTGGAACTGG TGGCCATCGC CGTGATCGCC GGTTTGCTGC TGGCAATTCC GCTGGGCATC
GCCCGCTCTT CGAAGCTGTG GTACGTGCGC GCTTTGCCCT ACGCCTATAT CTTCTTTTTC
CGTGGCACGC CGTTGCTGGT TCAACTGTTC CTGGTCTACT ACGGCCTGGC GCAGTTCGAT
GCGGTGCGTA ACAGTTCGAT GTGGCCGTAC CTGCGCGATC CGTTCTGGTG CGCCACCGCG
ACCATGACCC TGCACACCGC GGCGTACATC GCCGAGATCC TGCGCGGGGC GATCCAGGCG
ATTCCGCCGG GCGAGATCGA AGCGGCGCGG GCGCTGGGCA TGTCCCGACC GAAAGCGCTG
TTCTACATCA TCCTGCCGCG TGCCGCGCGT ATCGGCCTGC CGGCCTACAG CAACGAAGTG
ATCCTGATGC TCAAGGCCAG TGCCCTGGCC AGCACCGTGA CCCTGCTGGA ACTGACCGGC
ATGGCGCGCA CGATCATTGC CCGCACTTAC CTGCCGGTGG AGATCTTCTT CGCCGCCGGC
GTGTTCTATC TGGTGATGGC TTACGTGCTG GTTCGCGGCT TCAAACTGCT GGAACGCTGG
CTGCGCGTCG ATGCGTGCCA GGGACGCTGA
 
Protein sequence
MNWEVIIKWL PKLAQGATLT LELVAIAVIA GLLLAIPLGI ARSSKLWYVR ALPYAYIFFF 
RGTPLLVQLF LVYYGLAQFD AVRNSSMWPY LRDPFWCATA TMTLHTAAYI AEILRGAIQA
IPPGEIEAAR ALGMSRPKAL FYIILPRAAR IGLPAYSNEV ILMLKASALA STVTLLELTG
MARTIIARTY LPVEIFFAAG VFYLVMAYVL VRGFKLLERW LRVDACQGR