Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0289 |
Symbol | |
ID | 3712909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 335825 |
End bp | 336406 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
Protein accession | YP_346022 |
Protein GI | 77456517 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.590814 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGCCA TTCACACCTG CCACTGGAAA ATCTACATGA ATGTAATCAC CACCGACCTG CCTGGTGTCT TGATCATCGA ACCCAAGGTA TTTGGTGACG AACGCGGGTT CTTTTACGAA AGCTTCAATG CGAAAGCCTT TCAGGACGCG ACCGGCCTGG ACACGCAATT TGTCCAGGAC AACCATTCGC GCTCGCAGAA AGGCGTTCTG CGCGGGCTGC ATTACCAGTT GGAAAATACC CAGGGCAAAC TGGTCCGCGT TACCGCCGGC GAAGTCCTCG ACGTCGCCGT GGATATCCGT CGCAGCTCGC CGCATTTCGG CAAGTGGGTG GCCGTGCGTC TGTCCGCCGA CAACCACCGT CAATTGTGGG TTCCGGAAGG TTTCGCCCAC GGTTTCGTGG TGCTGAGCGA GTTCGCCGAA TTCCTCTACA AGACCACCGA CTACTACAAC CCGTCTTCCG AGCGCAGCAT TCGTTGGGAC GACCCGGATC TGGGCATCGA CTGGCAGCTG GATGAAGCGC CGAAACTGTC GGCCAAGGAC CAGGCGGCGG CACTGCTCAA GGACGCCGAC GTCTTTTCCT GA
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Protein sequence | MSAIHTCHWK IYMNVITTDL PGVLIIEPKV FGDERGFFYE SFNAKAFQDA TGLDTQFVQD NHSRSQKGVL RGLHYQLENT QGKLVRVTAG EVLDVAVDIR RSSPHFGKWV AVRLSADNHR QLWVPEGFAH GFVVLSEFAE FLYKTTDYYN PSSERSIRWD DPDLGIDWQL DEAPKLSAKD QAAALLKDAD VFS
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