Gene Pfl01_0289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0289 
Symbol 
ID3712909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp335825 
End bp336406 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content58% 
IMG OID 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_346022 
Protein GI77456517 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.590814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCCA TTCACACCTG CCACTGGAAA ATCTACATGA ATGTAATCAC CACCGACCTG 
CCTGGTGTCT TGATCATCGA ACCCAAGGTA TTTGGTGACG AACGCGGGTT CTTTTACGAA
AGCTTCAATG CGAAAGCCTT TCAGGACGCG ACCGGCCTGG ACACGCAATT TGTCCAGGAC
AACCATTCGC GCTCGCAGAA AGGCGTTCTG CGCGGGCTGC ATTACCAGTT GGAAAATACC
CAGGGCAAAC TGGTCCGCGT TACCGCCGGC GAAGTCCTCG ACGTCGCCGT GGATATCCGT
CGCAGCTCGC CGCATTTCGG CAAGTGGGTG GCCGTGCGTC TGTCCGCCGA CAACCACCGT
CAATTGTGGG TTCCGGAAGG TTTCGCCCAC GGTTTCGTGG TGCTGAGCGA GTTCGCCGAA
TTCCTCTACA AGACCACCGA CTACTACAAC CCGTCTTCCG AGCGCAGCAT TCGTTGGGAC
GACCCGGATC TGGGCATCGA CTGGCAGCTG GATGAAGCGC CGAAACTGTC GGCCAAGGAC
CAGGCGGCGG CACTGCTCAA GGACGCCGAC GTCTTTTCCT GA
 
Protein sequence
MSAIHTCHWK IYMNVITTDL PGVLIIEPKV FGDERGFFYE SFNAKAFQDA TGLDTQFVQD 
NHSRSQKGVL RGLHYQLENT QGKLVRVTAG EVLDVAVDIR RSSPHFGKWV AVRLSADNHR
QLWVPEGFAH GFVVLSEFAE FLYKTTDYYN PSSERSIRWD DPDLGIDWQL DEAPKLSAKD
QAAALLKDAD VFS