Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0288 |
Symbol | |
ID | 3712908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 333910 |
End bp | 335724 |
Gene Length | 1815 bp |
Protein Length | 604 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | histidine kinase |
Protein accession | YP_346021 |
Protein GI | 77456516 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.709645 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCATGA CTCCGACCCT ACCCCGCCGC CCCCGATGGC GCAGTCTTGC CCTGCTGGCC CTGTGCCTGG CACCGCTGCT GTGGCCGCTG GAACATCTGG CCGAGCGCTA TTACCGCAGC GAACTGGCCG GCCAGAACCG TCAGACCCTC GACCTCTACG TCGCCAACCT GCTGGGCACG CTGCATCGCT ATGAAGTGCT GCCACAAATC CTCGGCGACC TGCCGGCCCT GCGCGCAGTG CTCGGGGCGC CGGATGACGG CGTGACCCAG GGCAACGCCA ACCGCCTGTT GAAGAACATC GCTGCGCAGA CCGGCGCCGA AGTCATGTAC CTGATGGACA CCAGCGGCCA GACGCTCGCG GCGTCGAACT GGGACAAGCA CGACAGTTTC GTCGGGCGCA ATTTCTCGTT CCGGCCGTAC TTCAGCGAGG CCATGGCCGG CCGCCTCGGG CGCTTCTTCG GTCTGGGCAC CACTTCCGCC AAACGCGGCT ATTTCTTCGC CGCAGCGGTG CGCAACGGCG AAAAAATCAT CGGTGTACTG GTGATCAAGG TAGATCTGGA CCACACCGAA AGCCTGTGGG GCAAAACCCC GGAACAACTG CTGGTGACCG ACCACAACGG TGTCGTCATC CTCACCTCGC GCCCGGAATG GCGCTTTCGC GCGACCCGCA CCCTCAGTGA TGCCGAGCGC TCGGCAATCA CCGCGATCCA GCCCTACCCG ACCCGCGAGC CACGCCCCCT GAACCTGAGC CCGACCGCGT GGCTGCCACA GACCCAGGAC ATCGCGGAAA CCGGCTGGAG CGTCAGCATT CTGGCCCCGC GCACGTTGAT CGACCGACCG GTGCGTACCG TGGTGGCGAT CGGCGGCGCC ACCTTGCTGG TAGTCATGTT GTTGCTGGGC CTGATGATGC AGCGTCGTCG TCATTACCTG GAACGGATCG CCTTCGAAGC CAAGGCCCGC CGGGAACTCG AAGGCCGGGT TGCCGAGCGC ACCAGTGATC TCGAAGGCCT CAACCGCCGA CTGAAACAGG AAGTGCTTGA ACGCGAACAG GCCCAGCAGG AACTGGTGCG GGCCCAGGAC GATCTGGTAC AGGCCGGCAA GCTGTCGGCG CTGGGGACGA TGTCGGCGAG CATCAGCCAC GAACTCAACC AGCCGCTGGC GGCGATCCGC AGCTACGCCG AGAACGCCGA AGTGCTGCTC GACCACGAAC GCACCGAAGA CGCACGAGGC AACCTCAAAC TGATCAGCGA GCTGACCGGG CGCATGGCCT CGATCATCGC CCACCTGCGC GCCTTCGCCC GCCGCGACCG CCACGCCCCG GAAAGCGTCG CCCTGCAACC CGCGCTGGAC GACGCGCTCG CCTTGCTGGC CAAGCGTCGC CGGAGCATGG ATGTCGAGCT GATCCGCGAC CTGCCCGCCG CCACCCTGTG GGTCGAGGCC GGGGAAACCC GACTGCGCCA GGTGCTGGGC AACCTGCTGG CCAACGCCCT CGACGCCCTG ACCGAAAAAG GCCCGCCGCG CAAATTGTGG CTGAGTGCCG AATCCACCGA CGAAGGCGTC AACCTGTACA TTCGCGACAA TGGCCCGGGT TTCTGCATGG AAGCCCTGGG CCGTGCCAGC GAACCGTTTT ACACGACCAA GACCCGCACT CAGGGCCTGG GTTTAGGGTT GGCCATTTGC GAAACCCTGA TGCGCGCCTT CGGTGGTGAA CTGTCGTTCG CCAACCACAA GCAAGGTGGC GCCTTGATCA CCCTGCGGCT GCGCGCCGGC GCGCCCGGGG TCAGCCTGCA ACCGTCCGAG GATCGAAGCG CATGA
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Protein sequence | MLMTPTLPRR PRWRSLALLA LCLAPLLWPL EHLAERYYRS ELAGQNRQTL DLYVANLLGT LHRYEVLPQI LGDLPALRAV LGAPDDGVTQ GNANRLLKNI AAQTGAEVMY LMDTSGQTLA ASNWDKHDSF VGRNFSFRPY FSEAMAGRLG RFFGLGTTSA KRGYFFAAAV RNGEKIIGVL VIKVDLDHTE SLWGKTPEQL LVTDHNGVVI LTSRPEWRFR ATRTLSDAER SAITAIQPYP TREPRPLNLS PTAWLPQTQD IAETGWSVSI LAPRTLIDRP VRTVVAIGGA TLLVVMLLLG LMMQRRRHYL ERIAFEAKAR RELEGRVAER TSDLEGLNRR LKQEVLEREQ AQQELVRAQD DLVQAGKLSA LGTMSASISH ELNQPLAAIR SYAENAEVLL DHERTEDARG NLKLISELTG RMASIIAHLR AFARRDRHAP ESVALQPALD DALALLAKRR RSMDVELIRD LPAATLWVEA GETRLRQVLG NLLANALDAL TEKGPPRKLW LSAESTDEGV NLYIRDNGPG FCMEALGRAS EPFYTTKTRT QGLGLGLAIC ETLMRAFGGE LSFANHKQGG ALITLRLRAG APGVSLQPSE DRSA
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