Gene Pfl01_0287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0287 
Symbol 
ID3712907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp332525 
End bp333913 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content65% 
IMG OID 
Producttwo component, sigma-54 specific, Fis family transcriptional regulator 
Protein accessionYP_346020 
Protein GI77456515 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.378858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCG ACAACCGCAT CCAGGTGGTG CTGATCGACG ACGATCCGCA CCTGCGTCAG 
GCCCTCGGCC AGACCCTGGA TCTGGCCGGC CTGAAAATTC TTCCGCTGTC CGAAGCCAAG
GGCCTGGCCG CGCAACTGGA GCGTGACTGG CCGGGCGTCG TGGTCAGCGA CATCCGCATG
CCCGGCATGG ATGGCCTGGA GCTGCTGAGC GAACTGCACG CCCAGGACCC GGAACTGCCC
GTGCTGCTGA TCACTGGCCA CGGCGACGTG CCACTGGCCG TGCAGGCCAT GCGCGCCGGT
GCCTATGATT TTCTGGAAAA ACCCTTCGCC AGCGACGCCC TGCTCGACAG CGTGCGCCGC
GCCCTGGCCC TGCGGCGTCT GGTGCTGGAC AACCGCAGCC TGCGCATGGC CCTGAGCGAT
CGCAACGAGT TGAGCGCGCG GCTGGTCGGT CAATCCGCGC CGATGTTGCG CCTGCGCGAG
CAGATCGGCG CACTGGCGGC GACCAAGGCC GATGTCTTGA TCCTCGGCGA AACCGGCGCG
GGTAAAGAAG TTGTCGCCCG CGCCCTGCAC GATCTGTCGA GCCGGCGTAA TGGCCCGTTC
GTGGCAATCA ATGCCGGTGC GCTGGCCGAG TCGGTGGTCG AAAGCGAACT GTTCGGCCAT
GAACCCGGCG CCTTCACCGG CGCGCAAAAG CGCCGGATCG GCAAGTTCGA ATTCGCCAAT
GGCGGCACGC TGTTCCTCGA CGAAATCGAG AGCATGAGCA TGGACGTGCA GGTCAAACTG
CTGCGCATGC TGCAGGAGCG CGTGGTCGAA CGACTGGGCG GCAATCAGTT GATCCCGCTG
GACATCCGCG TCATCGCCGC CACCAAGGAA GACCTGCGCC AGGCCGCCGA TCAGGGGCGA
TTCCGGGCGG ACTTGTATTA CCGCCTCAAC GTGGCGCCGC TGCGCATTCC ACCACTGCGT
GAACGGGGCG AAGACGCGTT GATGCTGTTC CAGCATTACG CCGACGAAGC CAGCGCCCGC
CATGGTCTGC CAGCGCATGA ACTGCAACCG GCCCAACGGG CGCTGCTGCT GCGCCATTCA
TGGCCGGGCA ACGTGCGGGA ATTGCAGAAC GCAGCGGAGC GTTTTGCCCT CGGCCTGGAG
CTGGCGCTGG ACAACACACA GCCCGATGGC AGCCCCGGCA CCAGCGTCGA AATCACGGCG
GGAGGGCTCA GCGAACAAGT GGAAAACTTC GAGAAATCCC TGATCGCCGC CGAACTGGCC
CGCTCTCACG GTTCCGTGCG CAGTCTCGCC GAGGCCCTGG GCATTCCGCG CAAGACCCTG
CACGACAAAC TGCGCAAGCA CGGCCTGAAT TTCGCTGGCA GCGGCGGCCA TTCCGACGAA
TCCGAATGA
 
Protein sequence
MTIDNRIQVV LIDDDPHLRQ ALGQTLDLAG LKILPLSEAK GLAAQLERDW PGVVVSDIRM 
PGMDGLELLS ELHAQDPELP VLLITGHGDV PLAVQAMRAG AYDFLEKPFA SDALLDSVRR
ALALRRLVLD NRSLRMALSD RNELSARLVG QSAPMLRLRE QIGALAATKA DVLILGETGA
GKEVVARALH DLSSRRNGPF VAINAGALAE SVVESELFGH EPGAFTGAQK RRIGKFEFAN
GGTLFLDEIE SMSMDVQVKL LRMLQERVVE RLGGNQLIPL DIRVIAATKE DLRQAADQGR
FRADLYYRLN VAPLRIPPLR ERGEDALMLF QHYADEASAR HGLPAHELQP AQRALLLRHS
WPGNVRELQN AAERFALGLE LALDNTQPDG SPGTSVEITA GGLSEQVENF EKSLIAAELA
RSHGSVRSLA EALGIPRKTL HDKLRKHGLN FAGSGGHSDE SE