Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0287 |
Symbol | |
ID | 3712907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 332525 |
End bp | 333913 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | two component, sigma-54 specific, Fis family transcriptional regulator |
Protein accession | YP_346020 |
Protein GI | 77456515 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.378858 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATCG ACAACCGCAT CCAGGTGGTG CTGATCGACG ACGATCCGCA CCTGCGTCAG GCCCTCGGCC AGACCCTGGA TCTGGCCGGC CTGAAAATTC TTCCGCTGTC CGAAGCCAAG GGCCTGGCCG CGCAACTGGA GCGTGACTGG CCGGGCGTCG TGGTCAGCGA CATCCGCATG CCCGGCATGG ATGGCCTGGA GCTGCTGAGC GAACTGCACG CCCAGGACCC GGAACTGCCC GTGCTGCTGA TCACTGGCCA CGGCGACGTG CCACTGGCCG TGCAGGCCAT GCGCGCCGGT GCCTATGATT TTCTGGAAAA ACCCTTCGCC AGCGACGCCC TGCTCGACAG CGTGCGCCGC GCCCTGGCCC TGCGGCGTCT GGTGCTGGAC AACCGCAGCC TGCGCATGGC CCTGAGCGAT CGCAACGAGT TGAGCGCGCG GCTGGTCGGT CAATCCGCGC CGATGTTGCG CCTGCGCGAG CAGATCGGCG CACTGGCGGC GACCAAGGCC GATGTCTTGA TCCTCGGCGA AACCGGCGCG GGTAAAGAAG TTGTCGCCCG CGCCCTGCAC GATCTGTCGA GCCGGCGTAA TGGCCCGTTC GTGGCAATCA ATGCCGGTGC GCTGGCCGAG TCGGTGGTCG AAAGCGAACT GTTCGGCCAT GAACCCGGCG CCTTCACCGG CGCGCAAAAG CGCCGGATCG GCAAGTTCGA ATTCGCCAAT GGCGGCACGC TGTTCCTCGA CGAAATCGAG AGCATGAGCA TGGACGTGCA GGTCAAACTG CTGCGCATGC TGCAGGAGCG CGTGGTCGAA CGACTGGGCG GCAATCAGTT GATCCCGCTG GACATCCGCG TCATCGCCGC CACCAAGGAA GACCTGCGCC AGGCCGCCGA TCAGGGGCGA TTCCGGGCGG ACTTGTATTA CCGCCTCAAC GTGGCGCCGC TGCGCATTCC ACCACTGCGT GAACGGGGCG AAGACGCGTT GATGCTGTTC CAGCATTACG CCGACGAAGC CAGCGCCCGC CATGGTCTGC CAGCGCATGA ACTGCAACCG GCCCAACGGG CGCTGCTGCT GCGCCATTCA TGGCCGGGCA ACGTGCGGGA ATTGCAGAAC GCAGCGGAGC GTTTTGCCCT CGGCCTGGAG CTGGCGCTGG ACAACACACA GCCCGATGGC AGCCCCGGCA CCAGCGTCGA AATCACGGCG GGAGGGCTCA GCGAACAAGT GGAAAACTTC GAGAAATCCC TGATCGCCGC CGAACTGGCC CGCTCTCACG GTTCCGTGCG CAGTCTCGCC GAGGCCCTGG GCATTCCGCG CAAGACCCTG CACGACAAAC TGCGCAAGCA CGGCCTGAAT TTCGCTGGCA GCGGCGGCCA TTCCGACGAA TCCGAATGA
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Protein sequence | MTIDNRIQVV LIDDDPHLRQ ALGQTLDLAG LKILPLSEAK GLAAQLERDW PGVVVSDIRM PGMDGLELLS ELHAQDPELP VLLITGHGDV PLAVQAMRAG AYDFLEKPFA SDALLDSVRR ALALRRLVLD NRSLRMALSD RNELSARLVG QSAPMLRLRE QIGALAATKA DVLILGETGA GKEVVARALH DLSSRRNGPF VAINAGALAE SVVESELFGH EPGAFTGAQK RRIGKFEFAN GGTLFLDEIE SMSMDVQVKL LRMLQERVVE RLGGNQLIPL DIRVIAATKE DLRQAADQGR FRADLYYRLN VAPLRIPPLR ERGEDALMLF QHYADEASAR HGLPAHELQP AQRALLLRHS WPGNVRELQN AAERFALGLE LALDNTQPDG SPGTSVEITA GGLSEQVENF EKSLIAAELA RSHGSVRSLA EALGIPRKTL HDKLRKHGLN FAGSGGHSDE SE
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