Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0250 |
Symbol | |
ID | 3712142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 294146 |
End bp | 296371 |
Gene Length | 2226 bp |
Protein Length | 741 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | TonB-dependent receptor |
Protein accession | YP_345983 |
Protein GI | 77456478 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.513773 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAACA TTCCTGGGGC GACACACAAA CTGGCGCAAT CGATCCGCGC TGCGGGCTGG CTAATCACCG GGCTGGCTGC GCTGCCGCTG CCGGCCGCGT TCGCCGCCGA CAGCACCGAT CAGGAGCCGA CACTCAAGTC CGTCACGGTC ACCGCCACCC GCCGCGAAGA GTCGCTGCAA AAGGTCCCGG TGGCGGTGTC GGTGATCGAC GGCGAGCAGT TGGAACGCGA CAACCGCAAC AGCGTGGCGA GTATCGTCCA GCAAGTGCCG TCGCTGAATT TCCGCACCGG CGCATCGAAC AAGGACACCT CGTTGTTCGT GCGTGGCGTG GGGACGATTT CCACCTCGCC AGGCGTCGAG CCGACCGTGG CCACGGTGAT CGATGGCGTG GTCTATGCCC GTCCCGGCCA GTCCACTCTG GATCTGCTGG ACTTGGAACG CGTCGAAGTT CTGCGCGGCC CGCAAGGCAC GCTGTTCGGC AAGAACGCTT CGGCCGGCGT GCTGAACATC ACCAGCAAGG CGCCGACCGC CGAGACCCAC GGCTACATCG ATCAGTCGTA CTACAGCGGC AACGAAAGCC GCACCCGTTT CGGCATCGGC GGCAGTCTGA TTCCGGACAC GCTCAAGGGC TCGATCAGCA CCTTGTTCGG CACGTACGAC GGCAACGTCG ACAACCAGCA CAACGGTCAG GAGGTCAACG GCTATAACCA TCGTGGCGTG CGCGGCAAAC TGGAATTCAC CCCGAACGAC GACATCACCT TCACCCTGAT CGCCGACTAC ATGCAGTCCC ACGATGACGG CCCCAACGGC GTCGTGACCA AGGCTCTGAC CCCGGCTTTC GCCAATGCGT TGAGCCCGGT CAGTGCCACC AGCCACAACC GCGACATCAA CACCGACACC CGTTCCCACG TCGAGGACAC CAACAAGGGC CTGTCCGGCC AGCTCGATTG GCAACTGGGG GATTACACCC TGACCTCGAT TACCGCGTGG CGCGGCTGGG ACAACACTCA GTATCAGGAT GGCGACCGCC TCGGCAGGGT GACGGCTGCG TTCTCCGGCA CGGCGGACAA GGGCGATCTG GCCTTCGATC AGTACTCGCA GGAGCTGCGG CTGGCGTCGC CGAAAGGCGA GTTCCTCGAA TACGTCGGCG GCCTGTTCTA CATGCACGGC AAGGACGAGG AAACCTATCA GCGCACCCTG ACGACCACCA CGCGCACTGA TCGCGGCGTC GCCGATTACA GCACCACCAG CGACAGCTAT GCGGTGTTCG GCGAGAGCAC GCTGAATTTC ACCTCGGACT TTCGTGGCAT CGCCGGCCTG CGCTACACCC ACGACGATCT CGAATACGAT CACCGTCGCG TCTCCACGTC CGCCACCACC GTCAGCGGCA TTCAACCGGC CACCCGCAGT TCCGGTTCGG TGGACGAGGA CGGCTGGTCC GGCCGGCTCG GTTTGCAGTA CGACCTGAGC GATACCGTCA CCACCTACCT GACTTACTCG CGCGGCTACA AAGGCCCGGC CTACAACGTG TTCTTCAACA TGCAGCCGCG CGATACCGAA GCGCTGAAAC CGGAAACCTC CAACACCTGG GAGGCGGGGA TCAAAGCCTC GTCCTGGAAC AATCGCCTGA CAACCAACCT GGCGGTTTTC CACAGCGACT ACGACAACTA TCAGGCGAAC TTTTTCGACA CCGTCGCCGG GCAAGTCGTA ACGCGCCTGA TCAACGCCGG CAGCGTCAGC ACCGAGGGTG TGGAACTTGA TTTCGCCCTG CAGGCGACCC AGCAACTGAA GTTCTCCGGC GCGCTGGCCT ACACCCGCGC CCGCATCGAC GAGTTCGCCT GCCCGGCGGG CGCGGCGGCG TCGTGCAACG TCAACGGCAA GCCGCTGCCG TTCAGCCCGG ACTGGAAAAG CTACGTGCGG GCCGACTACA CCATCCCGCT GGATAACGGC CTGGATATCG AACTCGGCAC CGACTACAGC TGGCAGAGCG AAGTGCAGTA CGACATCAGC CAGAACGCCG ACACCAAGCA GGGCGCCTAC GGCCTCTGGA ATGCCAGCGT GGCCCTGGCC GATTACACCA ATGGCTGGCG CGTGGCATTG CTGGGCAAGA ACCTCACCGA CAAGTCGTAT TCGCCATTGC TCGCCAGCGG TGGCAACTAC ATCTACCGCG CCGTGCCTCG CGACGACGAG CGCTACTTCG GCGTGCAACT GCGCAAGGAC TTCTGA
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Protein sequence | MHNIPGATHK LAQSIRAAGW LITGLAALPL PAAFAADSTD QEPTLKSVTV TATRREESLQ KVPVAVSVID GEQLERDNRN SVASIVQQVP SLNFRTGASN KDTSLFVRGV GTISTSPGVE PTVATVIDGV VYARPGQSTL DLLDLERVEV LRGPQGTLFG KNASAGVLNI TSKAPTAETH GYIDQSYYSG NESRTRFGIG GSLIPDTLKG SISTLFGTYD GNVDNQHNGQ EVNGYNHRGV RGKLEFTPND DITFTLIADY MQSHDDGPNG VVTKALTPAF ANALSPVSAT SHNRDINTDT RSHVEDTNKG LSGQLDWQLG DYTLTSITAW RGWDNTQYQD GDRLGRVTAA FSGTADKGDL AFDQYSQELR LASPKGEFLE YVGGLFYMHG KDEETYQRTL TTTTRTDRGV ADYSTTSDSY AVFGESTLNF TSDFRGIAGL RYTHDDLEYD HRRVSTSATT VSGIQPATRS SGSVDEDGWS GRLGLQYDLS DTVTTYLTYS RGYKGPAYNV FFNMQPRDTE ALKPETSNTW EAGIKASSWN NRLTTNLAVF HSDYDNYQAN FFDTVAGQVV TRLINAGSVS TEGVELDFAL QATQQLKFSG ALAYTRARID EFACPAGAAA SCNVNGKPLP FSPDWKSYVR ADYTIPLDNG LDIELGTDYS WQSEVQYDIS QNADTKQGAY GLWNASVALA DYTNGWRVAL LGKNLTDKSY SPLLASGGNY IYRAVPRDDE RYFGVQLRKD F
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