Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0243 |
Symbol | |
ID | 3712135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 286335 |
End bp | 287000 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | amino acid ABC transporter permease |
Protein accession | YP_345976 |
Protein GI | 77456471 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0296123 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGAAG CTTTCCAACT CGCTCTGGAC TCCGCGCCCT TCCTGTTGAA GGGCGCGTAC TACACGGTAA TCCTCAGCCT CGGCGGCATG TTTTTCGGCC TGCTGCTGGG CTTTGGCCTG GCGTTGATGC GCCTGTCGCG TTTCAAGTCG GTCAGCTGGC TGGCCCGCAT CTACGTGTCG TTCTTTCGCG GCACGCCGTT GCTGGTGCAA CTGTTCGTGA TCTATTACGG CTTGCCGCAA TTGGGCATGG AACTCGACCC GCTGCCGGCG GCACTGATCG GCTTCTCGCT GAACATGGCC GCCTACGCCT GTGAAATCCT GCGTGCCGCG ATCGGTTCGA TCGAACGCGG CCAGTGGGAA GCCGCTGCGA GCATCGGCAT GACCCGTGCG CAGACCCTGC GCCGGGCCAT CCTGCCGCAG GCGATGCGCA CGGCGTTGCC GCCGCTGGGC AATAGTTTCA TTTCACTGGT CAAGGACACC GCACTGGCCG CCACCATTCA GGTGCCGGAG CTGTTCCGTC AGGCACAGCT GATTACCGCC CGGACTTTCG AAGTCTTCAC CATGTATCTT GCCGCCGCGC TGATCTACTG GATTCTGGCC ACGGTGCTGT CGCACTTCCA GAACAAGTTG GAAGAGCGGG TCAATCGGCA CGACCAGGAG TCCTGA
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Protein sequence | MEEAFQLALD SAPFLLKGAY YTVILSLGGM FFGLLLGFGL ALMRLSRFKS VSWLARIYVS FFRGTPLLVQ LFVIYYGLPQ LGMELDPLPA ALIGFSLNMA AYACEILRAA IGSIERGQWE AAASIGMTRA QTLRRAILPQ AMRTALPPLG NSFISLVKDT ALAATIQVPE LFRQAQLITA RTFEVFTMYL AAALIYWILA TVLSHFQNKL EERVNRHDQE S
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