Gene Pfl01_0243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0243 
Symbol 
ID3712135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp286335 
End bp287000 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content62% 
IMG OID 
Productamino acid ABC transporter permease 
Protein accessionYP_345976 
Protein GI77456471 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0296123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAG CTTTCCAACT CGCTCTGGAC TCCGCGCCCT TCCTGTTGAA GGGCGCGTAC 
TACACGGTAA TCCTCAGCCT CGGCGGCATG TTTTTCGGCC TGCTGCTGGG CTTTGGCCTG
GCGTTGATGC GCCTGTCGCG TTTCAAGTCG GTCAGCTGGC TGGCCCGCAT CTACGTGTCG
TTCTTTCGCG GCACGCCGTT GCTGGTGCAA CTGTTCGTGA TCTATTACGG CTTGCCGCAA
TTGGGCATGG AACTCGACCC GCTGCCGGCG GCACTGATCG GCTTCTCGCT GAACATGGCC
GCCTACGCCT GTGAAATCCT GCGTGCCGCG ATCGGTTCGA TCGAACGCGG CCAGTGGGAA
GCCGCTGCGA GCATCGGCAT GACCCGTGCG CAGACCCTGC GCCGGGCCAT CCTGCCGCAG
GCGATGCGCA CGGCGTTGCC GCCGCTGGGC AATAGTTTCA TTTCACTGGT CAAGGACACC
GCACTGGCCG CCACCATTCA GGTGCCGGAG CTGTTCCGTC AGGCACAGCT GATTACCGCC
CGGACTTTCG AAGTCTTCAC CATGTATCTT GCCGCCGCGC TGATCTACTG GATTCTGGCC
ACGGTGCTGT CGCACTTCCA GAACAAGTTG GAAGAGCGGG TCAATCGGCA CGACCAGGAG
TCCTGA
 
Protein sequence
MEEAFQLALD SAPFLLKGAY YTVILSLGGM FFGLLLGFGL ALMRLSRFKS VSWLARIYVS 
FFRGTPLLVQ LFVIYYGLPQ LGMELDPLPA ALIGFSLNMA AYACEILRAA IGSIERGQWE
AAASIGMTRA QTLRRAILPQ AMRTALPPLG NSFISLVKDT ALAATIQVPE LFRQAQLITA
RTFEVFTMYL AAALIYWILA TVLSHFQNKL EERVNRHDQE S