| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0237 |
|---|
| Symbol | |
|---|
| ID | 3712129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 279433 |
|---|
| End bp | 280242 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | NLPA lipoprotein |
|---|
| Protein accession | YP_345970 |
|---|
| Protein GI | 77456465 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.200335 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGA AACTGCTGTC CCACCCAGTC AAAGCACTGG CCCTGGCCTT CGGCCTGTTC
AGCTCGGCTG TTTTCGCCGC CGATGCCCCG TTGAAAATCG GCACTACCGC CGCCTTCGCG
ATTCCGCTGG AAGCCGCAGT CGAAGAGGCC TCCAAACAAG GCCTGAAAGT CGAGCTGGTG
GAATTCACCG ACTGGATCGC GCCGAACGTC AGCCTCGCCG CCGGTGACAT CGACGTGAAC
TACTTCCAGC ACATTCCGTT CCTGGAAAAC GCCAAGGCCG CCTCCGGTTT CGACCTGGTG
CCGTTCGCCC CGGGGATCAT CAACAACGTC GGCCTGTATT CGAAGAAATA CAAAAGCTTC
GACGAGCTGC CGGAAGGCGC CAGCGTCGCC ATTGCCAACG ACCCGATCAA CAGCGGTCGC
GGTCTGCAAC TGCTGGCCAA AGCCGGTCTG ATCACCCTCA AACCAGGCGT CGGCTACAAG
GCTACCGAAG ACGACATCGT CGCCAACCCG AAGAAAATCA AGATCCTGCA GGTCGAAGCG
GTGCAACTGG TGCGCGCCTA CGATGACGCC GATCTGGTCC AGGGCTATCC GGCCTACATT
CGTCTGGCGA AGACTTTCGA TGCCGGCTCC GCACTGCTGT TCGACGGCCT CGACCACAAG
GAATACGTGA TCCAGTTCGT GATCCAGCCG AAGAGCAAGA CCGACCCGCG CCTGATCAAG
TTCGTCGACA TTTACCAACA TTCGCCAGCC GTTCGCGCCG CACTGGATAA GGCCCACGGC
AAGCTGTACC AGGCCGGTTG GGAAAGCTGA
|
|---|
| Protein sequence | MTKKLLSHPV KALALAFGLF SSAVFAADAP LKIGTTAAFA IPLEAAVEEA SKQGLKVELV
EFTDWIAPNV SLAAGDIDVN YFQHIPFLEN AKAASGFDLV PFAPGIINNV GLYSKKYKSF
DELPEGASVA IANDPINSGR GLQLLAKAGL ITLKPGVGYK ATEDDIVANP KKIKILQVEA
VQLVRAYDDA DLVQGYPAYI RLAKTFDAGS ALLFDGLDHK EYVIQFVIQP KSKTDPRLIK
FVDIYQHSPA VRAALDKAHG KLYQAGWES
|
|---|
| |