Gene Pfl01_0228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0228 
Symbol 
ID3712081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp268015 
End bp268893 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content60% 
IMG OID 
Productextracellular solute-binding protein 
Protein accessionYP_345961 
Protein GI77456456 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.946575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTG CCAAAGCCCT ATTCGCACTC CCGCTGATCA GCCTTGCGCT GCTGGCCGGC 
TGCAACAAGA CCGAAGAACC GGCCAAGCCC AAAGTCGCCA GCGAAAGCAC CGCGCCGGCC
GGTTATCTGG ACAAGATAAA GGCCCGCGAC AAACTGATCG TCGGCGTGTT CACCGACAAA
CCGCCGTTCG GTTTCGTCAA CGAAGCGGGG CGTTACGTCG GCTTCGATAC CGACATCGGC
CGTCAATTCG CCAAGGATCT GCTGGGCGAT GAAAACAAGG TCGAGTTCGT GGCCGTGGAA
CCGGCGAGCC GCATTCCGTT CCTGCAAAGC GACAAGGTCG ACCTGATCCT CGCCAACATG
ACCGTGACCC CGGAGCGCAA GGAAGCGGTG GAATTCACCA ACCCGAACCT CAAGGTCGCG
GTGCAGGCGC TGGTGCCCCA AGGCAGCGAG GTGAAAAAGC TGGATGACCT GGCGACCCGC
ACCACCATCG TCACCACCGG CACCACCGCC GATATCTGGC TGACCAAGAA CCACCCGGAC
TGGAAACTGC TGAAGTTCGA GAAAAACTCC GAGTCCCTGC AAGCCCTGGC CAACGGCCGT
GGCGATGCCT ACGCGCAGGA CAATCTGGTG CTGTTCAGCT GGGCCAAGCA GAACCCGGGC
TACCGCGTGC TGGACGAAAA ACTTGGCGCC GAAGCGCCGA TTGCGCCGGC GGTGAAGAAG
GGCAATATCG AATTGCGCGA TTGGGTGAAT GCGGAATTGG CCAAGCTGGG TGAAGAGAAA
TACCTGCTCA AGCTGTATGA CCAATACGTG CGCAAAGAGC TGAGCGATGA CACCAAGCCA
GAGAGCGTGA TTGTCGAAGG CGGGAAGTGG CAGGGCTAA
 
Protein sequence
MKTAKALFAL PLISLALLAG CNKTEEPAKP KVASESTAPA GYLDKIKARD KLIVGVFTDK 
PPFGFVNEAG RYVGFDTDIG RQFAKDLLGD ENKVEFVAVE PASRIPFLQS DKVDLILANM
TVTPERKEAV EFTNPNLKVA VQALVPQGSE VKKLDDLATR TTIVTTGTTA DIWLTKNHPD
WKLLKFEKNS ESLQALANGR GDAYAQDNLV LFSWAKQNPG YRVLDEKLGA EAPIAPAVKK
GNIELRDWVN AELAKLGEEK YLLKLYDQYV RKELSDDTKP ESVIVEGGKW QG