Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0225 |
Symbol | |
ID | 3712078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 265919 |
End bp | 266584 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | amino acid ABC transporter permease |
Protein accession | YP_345958 |
Protein GI | 77456453 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.506932 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTCG ATTACGCATT TATCCTCAGC ACCCTGCCGG CGTTTCTCAA GGCCGTGGGC GTGACGCTGC AGGTCGGTTT GATCGCCATT GGCACCTCGC TGCTGGTGGC GCTGCTCAAT GCGACGATTC TGGTGTTCCG CACGCCTTAC CTGCAAAAAC TGGTCGGGCT GTATGTGGAA CTGGCGCGCA ACACGCCGCT GCTGATCCAG TTGTTCTTCG TCTACTTCGC GCTGCCGGCA CTGGGGATCA AGGTTTCCGG ATTCACCGCG GCGATCATCA CCATGACTTT TCTTGGCGGT GCCTACCTCA CCGAAGTGCT GCGTGCCGGC GTCGATGCGG TGCCTCAGGC GCAACTGGAG TCCGGGCGCT CCATCGGTTT GTCCCACGGC CAGTTGCTGC GCTACGTGAT CCTGCCGCAG GCCGGGATTC TCAGCCTGCC GTCGCTGTTC GCCAATTTCA TTTTCCTGCT CAAGGAGACC ACCGTGGTCT CGGCCGTGGC GGTGCCGGAG ATTCTCTACA CCACCAAGAG CTACATCGCG CTCTACTACA AGACCTACGA AATGCTCGCC GTGCTGACGC TGATCTGCGT GCTGCTGTTC CTGCCGCTGT CGCTGCTGTT GAGCCGTCTG GAAAGGAGGC TCCAGCATGG CCAGTTCGGG TCTTGA
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Protein sequence | MTFDYAFILS TLPAFLKAVG VTLQVGLIAI GTSLLVALLN ATILVFRTPY LQKLVGLYVE LARNTPLLIQ LFFVYFALPA LGIKVSGFTA AIITMTFLGG AYLTEVLRAG VDAVPQAQLE SGRSIGLSHG QLLRYVILPQ AGILSLPSLF ANFIFLLKET TVVSAVAVPE ILYTTKSYIA LYYKTYEMLA VLTLICVLLF LPLSLLLSRL ERRLQHGQFG S
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