Gene Pfl01_0225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0225 
Symbol 
ID3712078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp265919 
End bp266584 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content60% 
IMG OID 
Productamino acid ABC transporter permease 
Protein accessionYP_345958 
Protein GI77456453 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.506932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTCG ATTACGCATT TATCCTCAGC ACCCTGCCGG CGTTTCTCAA GGCCGTGGGC 
GTGACGCTGC AGGTCGGTTT GATCGCCATT GGCACCTCGC TGCTGGTGGC GCTGCTCAAT
GCGACGATTC TGGTGTTCCG CACGCCTTAC CTGCAAAAAC TGGTCGGGCT GTATGTGGAA
CTGGCGCGCA ACACGCCGCT GCTGATCCAG TTGTTCTTCG TCTACTTCGC GCTGCCGGCA
CTGGGGATCA AGGTTTCCGG ATTCACCGCG GCGATCATCA CCATGACTTT TCTTGGCGGT
GCCTACCTCA CCGAAGTGCT GCGTGCCGGC GTCGATGCGG TGCCTCAGGC GCAACTGGAG
TCCGGGCGCT CCATCGGTTT GTCCCACGGC CAGTTGCTGC GCTACGTGAT CCTGCCGCAG
GCCGGGATTC TCAGCCTGCC GTCGCTGTTC GCCAATTTCA TTTTCCTGCT CAAGGAGACC
ACCGTGGTCT CGGCCGTGGC GGTGCCGGAG ATTCTCTACA CCACCAAGAG CTACATCGCG
CTCTACTACA AGACCTACGA AATGCTCGCC GTGCTGACGC TGATCTGCGT GCTGCTGTTC
CTGCCGCTGT CGCTGCTGTT GAGCCGTCTG GAAAGGAGGC TCCAGCATGG CCAGTTCGGG
TCTTGA
 
Protein sequence
MTFDYAFILS TLPAFLKAVG VTLQVGLIAI GTSLLVALLN ATILVFRTPY LQKLVGLYVE 
LARNTPLLIQ LFFVYFALPA LGIKVSGFTA AIITMTFLGG AYLTEVLRAG VDAVPQAQLE
SGRSIGLSHG QLLRYVILPQ AGILSLPSLF ANFIFLLKET TVVSAVAVPE ILYTTKSYIA
LYYKTYEMLA VLTLICVLLF LPLSLLLSRL ERRLQHGQFG S