Gene Pfl01_0223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0223 
Symbol 
ID3712076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp264659 
End bp265456 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content58% 
IMG OID 
ProductNLPA lipoprotein 
Protein accessionYP_345956 
Protein GI77456451 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.270071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGG TTCTGTTGTT TACCGCATTG GCGGCTGCTC TGACGGCTTC CCTGGCCCAG 
GCTGGCGAGA AACTGGTGGT GGCCGCGACG CCGGTGCCGC ACGCCGAGAT CCTCGAGCTG
ATCAAGCCGA CCCTCGCCAA AGAAGGCGTG GATCTGGAAA TCAAGGTCTT CACCGACTAC
GTACAGCCGA ACGTACAGGT GGGCGAGAAG CGTCTGGATG CCAACTACTT CCAGACCAAG
CCTTACCTGG ACAGCTTCAA CGCCGGCAAA TACAAGGATG ACAAGGCCAA GTACCTGGTG
ACCGTGCAAG GCGTGCACGT TGAACCGTTC GGTGGCTACT CGAGCAAGTA CAAGACCCTG
GCTGAACTGC CGGACGGCGC CACCATCGCC ATTCCGAACG AAGGCAGCAA CAGCGGTCGC
GCACTGATCC TGCTGCAGAA GGCTGGCCTG ATCGAACTGA AAGATCCGAA GAACGCCCTG
GCCACGCCAA AAGACATCGC CAAGAACCCG CACAACTTCA AGTTCAAGGA ACTGGAGTCG
GCCCTGCTGC CGCGTGTTCT GAAAGAAGTC GATCTGGACA TGATCAACAC CAACTACGCG
CTGGAAGCCA AGTTGAACCC GACCAAGGAC GCCCTGGTGA TCGAAGGCGC GGATTCGCCT
TACGTGAACT TCCTGGTTGC CCGTGAAGAC AACAAGAACA GCGATGCCAT CAAAAAACTG
GCCGCTGCCC TGACCAGCCC TGAAGTCAAA GCGTTCATCG AGAAGAAGTA CAACGGCGCG
GTACTGCCGG CGTTCTGA
 
Protein sequence
MKKVLLFTAL AAALTASLAQ AGEKLVVAAT PVPHAEILEL IKPTLAKEGV DLEIKVFTDY 
VQPNVQVGEK RLDANYFQTK PYLDSFNAGK YKDDKAKYLV TVQGVHVEPF GGYSSKYKTL
AELPDGATIA IPNEGSNSGR ALILLQKAGL IELKDPKNAL ATPKDIAKNP HNFKFKELES
ALLPRVLKEV DLDMINTNYA LEAKLNPTKD ALVIEGADSP YVNFLVARED NKNSDAIKKL
AAALTSPEVK AFIEKKYNGA VLPAF