Gene Pfl01_0220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0220 
Symbol 
ID3712073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp262353 
End bp262754 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content59% 
IMG OID 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_345953 
Protein GI77456448 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.594277 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTCT CCACGCAAGA CAGCGACGAG GTGCTGAGCG AGATCAACGT GACGCCGCTG 
GTGGACGTGA TGCTGGTGTT GCTTGTGGTG TTTATCGTCA CCGCGCCGCT TTTGACCAAC
GCGATACCGA TCAACCTGCC GAAGACCGAA GCGGTGGCGC CGGTCGAGCA GAAAGACCCG
TTGGTGGTGA GTATCGACGG TGCTGGAAAA CTGTTTATCA ACAAGGACGA AATCCAGCCG
GATCTGCTGG AGTTCAACCT CAAGTCGGCC AAGGCCAAGG ACCCGGAAGT GCGCGTGCAA
TTGCAGGCCG ACGACGGGGT GAATTACGGC GAAGTGGCGC GAGCCATGGC TTCGATTGAG
CGGGCGGGCA TCACCAAGCT GTCGGTGATC ACTGCACGAT AA
 
Protein sequence
MAFSTQDSDE VLSEINVTPL VDVMLVLLVV FIVTAPLLTN AIPINLPKTE AVAPVEQKDP 
LVVSIDGAGK LFINKDEIQP DLLEFNLKSA KAKDPEVRVQ LQADDGVNYG EVARAMASIE
RAGITKLSVI TAR