| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0192 |
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| Symbol | |
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| ID | 3717543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 232056 |
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| End bp | 233987 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_345925 |
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| Protein GI | 77456420 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGGCC GAATGTCTGC CACTTACCGC GATGCCTTGC GTGCAGCGCT GCTTTACCTG
GTCCTTGCCG TGGTCTGGCT GCAAGGTACT GGTTATTTAT TGAACAGTTT CTTCGATAGC
TCTGACGAGT TGCTGCGCTG GCAACTGATC AACGGCTACC TGTTCGTGGC GCTCAGCGCC
GGGTTGATCT TCCTGGCCCG GGCGCGGCTG TTCGAATGCC TGGGCATCGG CGCCCGATTG
CGTGAACGCC AGGCAGATCG CGAACGCCTG CGTCAGGCCG CTGCGGTATT CGATTGCACC
CGCGAAGGCG TGCTGGTCAC GGACCGGCAG GGGCTGATCG TGCACGTCAA TCGCGCGTTC
ATGGAAATCA CCGGTTATCA GCGCGATGAA GTCATCGGCC AGCAGCCCAG CCTGTTCAAG
TCCGGGCATC ATCCGCCGGG GTTCTATCAA GCGATGTTCG CTTCTTTACA GGCGCGGGAC
GAATGGAGCG GCGAGATCTG GAACCGGCGC AAGAGCGGTG AAATCTACCC GCAATGGCAG
ACGATCCGGG TCATTCGTGA CGATGACAAC CGGCTCAGCC ATTACGTCGC GGTGTTTTCC
GACATCAGCG CAATCAAGGA TTCCGAACAC GAACTCAAGC ACCTGGCCCA CCACGATCCG
CTGACTGACC TGCCCAACCG TCTGCTGTTC AGCGACCGCG CCGAACAGGC GCTGGCATCG
GCGCAGACCC ACAAGCGCGG CTGCGCGCTG CTGATGATCG ATCTGGACCA TTTCAAACTG
ATCAACGACA GTCTTGGCCA CACTATCGGT GACCGTTTGC TCAAGGCGGT CGCCGCGCGT
TTGCAGGCGT TGTTCGGGCC GGGCATCACC CTGGCGCGGC TGGGCGGCGA TGAATTCGCG
GTTCTGCTGG AAAGTTGTCC ACAGCCGGCA CAGGCGGCAG CGCTGGCTCA GCGTATTCTC
GATGCGCTCA AGGAGCCGTT CTGCCTCGAC GGCCATGAAC TGTTCATCAA CGCCAGCCTC
GGCATCAGTC TGTTTCCCAG CGATGCGCTG AGCGCCGAAC AGCTGTTGCG CAACGCCGAT
GCGGCGCTGT TCAAGGCCAA GAGCAGCGGC CGCAATGGCT ACGCGCTGTA CACCGAAGAG
CTCACGGCTC ACGCCCAGCA GCGGGTCGAA ATCGCCTTCG AGTTGCGCCG CGCGCTGGAG
CAGCAGGAAC TGCGGGTCTA CTACCAACCG GTGCACGATC TGCAAACCAG TCGCCTGATC
GGCGTCGAGG CGCTGGTGCG CTGGGAGCAT CCGCAGCGGG GCCTGGTGTC GCCGGCGGAG
TTCATCCCGA TTGCCGAGCG CACCGGGCTG ATCTCGGAGA TCGACGCCTG GGTCATGCAG
CAGGCCTGCC GGCAGATGTG CCAATGGCAG CAGGCCGGGG TGGTGCTGTC GTTTGTCGCG
GTCAACGTGT CCTCGCGGTT ATTCGCTCGC CGCGAGTTGT ATCAGCAGGT TGCGCAGGTG
CTGCACGAGA CTGGCCTGGA TCCGGCTTAT CTGGAACTGG AGGTCACCGA AAGCGCGGTG
ATGGACGATC CGGAAGTCGC GCTGGAGCAG ATGCATCGGC TGCGCGAGCT GGGCATTCGT
CTGGCCATCG ATGACTTCGG CACCGGTTAT TCGTCGTTGC TGCGGCTCAA GCGCCTGCCG
GTGCAGAAGC TCAAGATCGA TCAGGGCTTC GTCGCCGGCC TGCCGTGGGA CGAGGACGAC
GCTGCGATCG TCCGGGTGAT CATCGCCCTG GCCCGCAGCA TGGGCATGCA GGTGCATGCC
GAGGGCATCG AGCAGGTGGA ACAGGCGGCG TTCCTGCTGG GCCAGGCCTG TGATCTGGGG
CAGGGCTACT GGTTTGGGCG GCCGGTCCCG GAAGCGCAAA TCGACTGGAA CCGGGCGCCC
TTGATCGGTT GA
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| Protein sequence | MDGRMSATYR DALRAALLYL VLAVVWLQGT GYLLNSFFDS SDELLRWQLI NGYLFVALSA
GLIFLARARL FECLGIGARL RERQADRERL RQAAAVFDCT REGVLVTDRQ GLIVHVNRAF
MEITGYQRDE VIGQQPSLFK SGHHPPGFYQ AMFASLQARD EWSGEIWNRR KSGEIYPQWQ
TIRVIRDDDN RLSHYVAVFS DISAIKDSEH ELKHLAHHDP LTDLPNRLLF SDRAEQALAS
AQTHKRGCAL LMIDLDHFKL INDSLGHTIG DRLLKAVAAR LQALFGPGIT LARLGGDEFA
VLLESCPQPA QAAALAQRIL DALKEPFCLD GHELFINASL GISLFPSDAL SAEQLLRNAD
AALFKAKSSG RNGYALYTEE LTAHAQQRVE IAFELRRALE QQELRVYYQP VHDLQTSRLI
GVEALVRWEH PQRGLVSPAE FIPIAERTGL ISEIDAWVMQ QACRQMCQWQ QAGVVLSFVA
VNVSSRLFAR RELYQQVAQV LHETGLDPAY LELEVTESAV MDDPEVALEQ MHRLRELGIR
LAIDDFGTGY SSLLRLKRLP VQKLKIDQGF VAGLPWDEDD AAIVRVIIAL ARSMGMQVHA
EGIEQVEQAA FLLGQACDLG QGYWFGRPVP EAQIDWNRAP LIG
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