Gene Pfl01_0190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0190 
Symbol 
ID3717541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp229602 
End bp230591 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content62% 
IMG OID 
Productdiguanylate cyclase 
Protein accessionYP_345923 
Protein GI77456418 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAACA ACAATCAAAA AGACTCATCC CCTCCCCAGT GGCCCGAGGC CGCGCAAACC 
CTGATGGCAT TGATGCACGC CCAGGGCGAA GTCGCCCGAC TGAGCGAACG CGAGCAGCTG
TTCAGTTCGC TGCTGGTCAG CGTCAACGCC GTGCTTTGGG CCTTCAACTG GGAAACCCGT
CAGGTGTTGT ACGTCAGCCC CGCTTACGAG CGGATCTTCG GTCGTTCCGC CGGCCTGTTG
CTGGCCGACT ACAACCAGTG GCGCGACAGC ATCTACCCGG ATGATCTGGA ATACGCCGAA
CGCAGCCTCG CCGAAGTGCT GCATAAAGGC GCCGTAGAAG ACCGCGAATA CCGGATCATC
GCCGCCGACG GCCAGGTTCG CTGGATCAGT GACAAGTGCT TCATCAACCG TCAGGACGAA
CCAGGGCAAC CGGTGATCAT CGTCGGCATC GCCGAAGACA TCACCGACAA GAAGCAGATG
GAAACCGAGC TCCAGCGCCT GGCCACCACC GACGTGCTGA CCCAGAGCAG CAATCGCCGG
CACTTCTTCG AATGCGCCCA CCGGGAATTT GAACAAGCCC GCCTGCAAGG CGCGCAAATG
GCGTTCCTGC TGCTGGACAT CGATGACTTC AAGGTGATCA ACGACACCTA CGGCCACCCC
GAGGGCGACA ATGTGCTGCA ACGGATCGCC GAATGCGGTC GTGCCTCGCT ACGTCGGGGC
GACCTGTTCG GGCGGATTGG CGGTGAGGAA TTTGCGGCGG TTTTCCCGGG CTGTGCGCCG
GACATGGCGA TGCAGGTGGC CGAACGGTTG CAACGGGAAA TTCAGCGGCT GAGCTTCAAT
CACGCCGATC AGACCTTCGG CATCACCGTC AGCCAGGGCC TGACCAGCCT CACCCCGGAA
GACGAAAGCC TCGACACCCT GTTCGCCCGC GCGGACGCAG CGATGTACGA GGCCAAACGG
CAGGGCAAGA ACCGGATCAT TTCCGCCTGA
 
Protein sequence
MVNNNQKDSS PPQWPEAAQT LMALMHAQGE VARLSEREQL FSSLLVSVNA VLWAFNWETR 
QVLYVSPAYE RIFGRSAGLL LADYNQWRDS IYPDDLEYAE RSLAEVLHKG AVEDREYRII
AADGQVRWIS DKCFINRQDE PGQPVIIVGI AEDITDKKQM ETELQRLATT DVLTQSSNRR
HFFECAHREF EQARLQGAQM AFLLLDIDDF KVINDTYGHP EGDNVLQRIA ECGRASLRRG
DLFGRIGGEE FAAVFPGCAP DMAMQVAERL QREIQRLSFN HADQTFGITV SQGLTSLTPE
DESLDTLFAR ADAAMYEAKR QGKNRIISA