Gene Pfl01_0183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0183 
Symbol 
ID3717533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp221537 
End bp223228 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content60% 
IMG OID 
Productvon Willebrand factor, type A 
Protein accessionYP_345916 
Protein GI77456411 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.174598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.439463 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTTC CTTCCACGCT TCTGCGCCCC CTTGCTGCCA GTGTGTTGCT GGTGGTTGCC 
GGTTGCGGCG TTTCCTCCAG CCCGGAAACC ACCGTCGCGC CGCCTCCGGC GCAGACTGAA
CTGAAGTCCT CCGTGCAGCC CGAAGCGGTC ATGGCCGATA GCGCGATGGC CAAGCGCAGT
GCACTGACGG CTCCGATCGC CAGTTTTGCA CCGATGCCGG CCGGTGAAAG TTATCCACAG
GGCTATCGCG ACGAACAGCG CGAGCAGTAC GCCAAGCTGG CCGACAATCC GATCCACAGC
GTCACCGAAA CCCCGGTCTC GACCTTTAGC GCCGATGTCG ACACCGGCGC CTACGCCAAT
GTGCGGCGCC TGCTCAATCA GGGTCGACTG CCGCCGGAAG GCGCGGTGCG GCTGGAGGAG
ATGGTCAATT ACTTTCCTTA CGACTACGCG TTGCCGAGCG ATGGCTCGCC CTTCGGCGTG
ACCACCGAAC TGGCTGCTTC ACCGTGGAAC CCGCACACCC GCTTGCTGCG TATCGGCATC
AAAGCGTCCG ACCGTGCGGT GGCGGAACTG GCCCCGGCGA ATCTGGTATT TCTGGTGGAT
GTGTCCGGCT CGATGGACCG CCGCGAAGGC TTGCCACTTG TCAAAAGCAC CCTGAAATTG
CTGGTCGATC AATTACGCGA ACAGGATCGG GTATCGCTGG TGGTGTATGC CGGTGAATCC
AGCGTGGTGC TGGAGCCGAC TTCCGGACGG GAAAAGGCGA AAATTCGCAC AGCCATCGAG
CGATTGACCG CCGGTGGCTC GACTGCTGGT GCGTCAGGCA TCGAACTGGC TTATCAGATG
GCGCAGCAGG CGTTCATCCC CAAAGGCATC AACCGCATCC TGTTGGCCAC CGACGGTGAC
TTCAACGTCG GCACCAGCGA CTTCGATAGC CTGAAACAAA TGGCTGTGGA TAAACGCAAG
ACCGGGATTT CTCTGACCAC CCTGGGTTTC GGTGTGGATA ACTACAATGA ACATCTGATG
GAACAACTGG CCGATGCCGG TGACGGCAAC TACGCCTACA TCGACAACCT GCGCGAAGCG
CGCAAGGTGC TGGTGGATCA ACTCGGTTCG ACCCTCGCCG TGGTGGCGAA AAACGTCAAG
TTGCAGGTCG AGTTCAACCC GGCGCAGGTC AGCGAATACC GGCTGCTCGG CTACGAAAAT
CGCGCGTTGA AGCGTGAGGA TTTCAGCAAT GACAAGGTTG ATGCCGGTGA AATCGGTGCA
GGCCATACGG TGACGGCGTT GTATGAAATT GTCCCGACAG GCGAGAAGGG CTGGCTGGAA
CCGCTGCGTT ACGGAAAAAC CGATGCAGTG GTTTCCGAGA AGAGAGGAGA ATTGGCAATG
CTGCGCGTGC GATATCAAAA GCCTGAGGGT GGGAAAAGTC TGCTGATCGA GCGGCCGATT
GCCAGTCAGG TTGCACCAGC CAGTGAAGAC CTGCGCTTTG CTGCCGCCGT CGCTGCGTTT
TCCCAGCAAC TCAAGGACGG CCGCTACACC GGCGATTTCA GCCTCAAGGA CACCGAAGCC
CTGGCCCGCG GTGCCCGCGG CGATGACCGC TTCGGCTTGC GCAACGAGTT CGTGCAACTG
GTGGAACTGG CGCAGAGCCT GCGTACCTCC ACCGCCTCCA ACGGAATGTC CACTGAGCGA
CGGATTGAAT AG
 
Protein sequence
MSLPSTLLRP LAASVLLVVA GCGVSSSPET TVAPPPAQTE LKSSVQPEAV MADSAMAKRS 
ALTAPIASFA PMPAGESYPQ GYRDEQREQY AKLADNPIHS VTETPVSTFS ADVDTGAYAN
VRRLLNQGRL PPEGAVRLEE MVNYFPYDYA LPSDGSPFGV TTELAASPWN PHTRLLRIGI
KASDRAVAEL APANLVFLVD VSGSMDRREG LPLVKSTLKL LVDQLREQDR VSLVVYAGES
SVVLEPTSGR EKAKIRTAIE RLTAGGSTAG ASGIELAYQM AQQAFIPKGI NRILLATDGD
FNVGTSDFDS LKQMAVDKRK TGISLTTLGF GVDNYNEHLM EQLADAGDGN YAYIDNLREA
RKVLVDQLGS TLAVVAKNVK LQVEFNPAQV SEYRLLGYEN RALKREDFSN DKVDAGEIGA
GHTVTALYEI VPTGEKGWLE PLRYGKTDAV VSEKRGELAM LRVRYQKPEG GKSLLIERPI
ASQVAPASED LRFAAAVAAF SQQLKDGRYT GDFSLKDTEA LARGARGDDR FGLRNEFVQL
VELAQSLRTS TASNGMSTER RIE