Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0183 |
Symbol | |
ID | 3717533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 221537 |
End bp | 223228 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | von Willebrand factor, type A |
Protein accession | YP_345916 |
Protein GI | 77456411 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.174598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.439463 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCTTC CTTCCACGCT TCTGCGCCCC CTTGCTGCCA GTGTGTTGCT GGTGGTTGCC GGTTGCGGCG TTTCCTCCAG CCCGGAAACC ACCGTCGCGC CGCCTCCGGC GCAGACTGAA CTGAAGTCCT CCGTGCAGCC CGAAGCGGTC ATGGCCGATA GCGCGATGGC CAAGCGCAGT GCACTGACGG CTCCGATCGC CAGTTTTGCA CCGATGCCGG CCGGTGAAAG TTATCCACAG GGCTATCGCG ACGAACAGCG CGAGCAGTAC GCCAAGCTGG CCGACAATCC GATCCACAGC GTCACCGAAA CCCCGGTCTC GACCTTTAGC GCCGATGTCG ACACCGGCGC CTACGCCAAT GTGCGGCGCC TGCTCAATCA GGGTCGACTG CCGCCGGAAG GCGCGGTGCG GCTGGAGGAG ATGGTCAATT ACTTTCCTTA CGACTACGCG TTGCCGAGCG ATGGCTCGCC CTTCGGCGTG ACCACCGAAC TGGCTGCTTC ACCGTGGAAC CCGCACACCC GCTTGCTGCG TATCGGCATC AAAGCGTCCG ACCGTGCGGT GGCGGAACTG GCCCCGGCGA ATCTGGTATT TCTGGTGGAT GTGTCCGGCT CGATGGACCG CCGCGAAGGC TTGCCACTTG TCAAAAGCAC CCTGAAATTG CTGGTCGATC AATTACGCGA ACAGGATCGG GTATCGCTGG TGGTGTATGC CGGTGAATCC AGCGTGGTGC TGGAGCCGAC TTCCGGACGG GAAAAGGCGA AAATTCGCAC AGCCATCGAG CGATTGACCG CCGGTGGCTC GACTGCTGGT GCGTCAGGCA TCGAACTGGC TTATCAGATG GCGCAGCAGG CGTTCATCCC CAAAGGCATC AACCGCATCC TGTTGGCCAC CGACGGTGAC TTCAACGTCG GCACCAGCGA CTTCGATAGC CTGAAACAAA TGGCTGTGGA TAAACGCAAG ACCGGGATTT CTCTGACCAC CCTGGGTTTC GGTGTGGATA ACTACAATGA ACATCTGATG GAACAACTGG CCGATGCCGG TGACGGCAAC TACGCCTACA TCGACAACCT GCGCGAAGCG CGCAAGGTGC TGGTGGATCA ACTCGGTTCG ACCCTCGCCG TGGTGGCGAA AAACGTCAAG TTGCAGGTCG AGTTCAACCC GGCGCAGGTC AGCGAATACC GGCTGCTCGG CTACGAAAAT CGCGCGTTGA AGCGTGAGGA TTTCAGCAAT GACAAGGTTG ATGCCGGTGA AATCGGTGCA GGCCATACGG TGACGGCGTT GTATGAAATT GTCCCGACAG GCGAGAAGGG CTGGCTGGAA CCGCTGCGTT ACGGAAAAAC CGATGCAGTG GTTTCCGAGA AGAGAGGAGA ATTGGCAATG CTGCGCGTGC GATATCAAAA GCCTGAGGGT GGGAAAAGTC TGCTGATCGA GCGGCCGATT GCCAGTCAGG TTGCACCAGC CAGTGAAGAC CTGCGCTTTG CTGCCGCCGT CGCTGCGTTT TCCCAGCAAC TCAAGGACGG CCGCTACACC GGCGATTTCA GCCTCAAGGA CACCGAAGCC CTGGCCCGCG GTGCCCGCGG CGATGACCGC TTCGGCTTGC GCAACGAGTT CGTGCAACTG GTGGAACTGG CGCAGAGCCT GCGTACCTCC ACCGCCTCCA ACGGAATGTC CACTGAGCGA CGGATTGAAT AG
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Protein sequence | MSLPSTLLRP LAASVLLVVA GCGVSSSPET TVAPPPAQTE LKSSVQPEAV MADSAMAKRS ALTAPIASFA PMPAGESYPQ GYRDEQREQY AKLADNPIHS VTETPVSTFS ADVDTGAYAN VRRLLNQGRL PPEGAVRLEE MVNYFPYDYA LPSDGSPFGV TTELAASPWN PHTRLLRIGI KASDRAVAEL APANLVFLVD VSGSMDRREG LPLVKSTLKL LVDQLREQDR VSLVVYAGES SVVLEPTSGR EKAKIRTAIE RLTAGGSTAG ASGIELAYQM AQQAFIPKGI NRILLATDGD FNVGTSDFDS LKQMAVDKRK TGISLTTLGF GVDNYNEHLM EQLADAGDGN YAYIDNLREA RKVLVDQLGS TLAVVAKNVK LQVEFNPAQV SEYRLLGYEN RALKREDFSN DKVDAGEIGA GHTVTALYEI VPTGEKGWLE PLRYGKTDAV VSEKRGELAM LRVRYQKPEG GKSLLIERPI ASQVAPASED LRFAAAVAAF SQQLKDGRYT GDFSLKDTEA LARGARGDDR FGLRNEFVQL VELAQSLRTS TASNGMSTER RIE
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