Gene Pfl01_0176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0176 
Symbol 
ID3717526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp211087 
End bp212592 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content60% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_345909 
Protein GI77456404 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.785731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAT CAGCAGGCGT GCTTCTCGGA ATTGTTGTGG CCATTGGCGC CATCAGCGTA 
GGCGGGGCCT GGTACACCGG CACCAAAATC GAAGGCGTGC TGAACAACGC CGTCGCCAAT
GCCAACAGCG AGTTGCAGAC CGCCATGGCC GGCTCCAACG GCAGTGCATC GCTGGAGCTG
GTGTCGCTGG AGCGCAACAC CTTCAGCAGC ACCGCGCACT ATCGCCTCAA GGGCGAGGGT
GAAATGTTCG GCGAAGCGCC GGTCGAGCTG CTGTTCGTCG ACCACATCGA ACACGGCCCG
CTGCCGTTCT CGCGTCTGGT GTCGCTGAAA TGGCTGCCGG TCATGGCCAC CAGTCACTTC
GAACTGGAAA AGACCCCAAT CACCGAAAAA TGGTTTGCCG CCACCAAGGG CGCGGCGCCG
CTCAAAGGTG TGGTCAATAT CGGCTACGAC CAGTCCACCA CCGGCAACCT CGAACTGCTG
CCACTGGAAA CCGCGCTGGA TGACAAGTCG AACCTGAAGT TTTCCGGCTT GAACATGGAT
ATTTCCGCCA GCGCCCAGGC CCAGAAGGTC AAAGCCAACG GTTACATGGA CAGCCTGCAC
CTGAGCACGG TCGCCGAAGA CCAGACGCCG GTGCAGATCG AACTCAATGG CCTGACCCTG
GCCAGCAATC TCGCCAAAAG CACCTACGGC TACTACACCG GCGAGAACAC CCTGGAACTG
ACCAGCAGCA AGACCACCTT CGGCGCCAAG CAGTCGGTGC TGGGTGTGAA GAACTTCGAA
ATGAAGAACC GTACCGAAGA GAACGGCAGC AACGCCTCCG GCCGTGCCGA CTACAAGGTC
GCTGAAGTAA CCCTCAACGA CAAGAAGATC GGTTCGGCCA ACCTGGCCAT GAGCCTGAAA
AACCTCGACA TTCCGTCGGC GATGTCGCTG ATGCAGATCT ACCAGACCAA GCTGCAGCCT
TACGAAAAAG CCGCTGCCGA AGCCACCGCC GCCGGCCTGC CGGCACCGGA GCTGAACCTG
ACCGAGGCCG AGTCGACCCA GGTCAAGGCC GACCTGCAGA AACTGCTGGC GGCCGGGCCG
CAACTGGCGC TGGAAGACCT GTCGCTGAAA ACCGCCAACG GCGAAAGCCG GGCGAATCTG
GTGCTTGATC TGACCAAGCC TGCGTCGATG GACCTGCCAC CGGATCAACT GGGCAAACAG
TTGATCGCGC TGCTGGACAT CAATGTGTTG GTGTCCAAGC CGATGCTGGT CGACCTGCTC
AGCGTGCAGG CGCAAATCGA TGGCCAGACC GATGCCAAGG CCATCGTTGA CCAGGCCAGC
GCTGGCGCTG ACATGTTCGC CGGCATGGCC GTTGGTTCGC AGTTGGCGAC ACTGGATGGC
ACCAACGTTG TCACCAAGCT GCATTACGCC GCCAATCAGG TTGAATTCAA CGGCCAGAAG
ATGACCGTCG AGCAGTTCGT GGGCTTCCTG ATGAGCAAGT TCGGCAGTAT CGAACAGCCT
CAGTAA
 
Protein sequence
MNKSAGVLLG IVVAIGAISV GGAWYTGTKI EGVLNNAVAN ANSELQTAMA GSNGSASLEL 
VSLERNTFSS TAHYRLKGEG EMFGEAPVEL LFVDHIEHGP LPFSRLVSLK WLPVMATSHF
ELEKTPITEK WFAATKGAAP LKGVVNIGYD QSTTGNLELL PLETALDDKS NLKFSGLNMD
ISASAQAQKV KANGYMDSLH LSTVAEDQTP VQIELNGLTL ASNLAKSTYG YYTGENTLEL
TSSKTTFGAK QSVLGVKNFE MKNRTEENGS NASGRADYKV AEVTLNDKKI GSANLAMSLK
NLDIPSAMSL MQIYQTKLQP YEKAAAEATA AGLPAPELNL TEAESTQVKA DLQKLLAAGP
QLALEDLSLK TANGESRANL VLDLTKPASM DLPPDQLGKQ LIALLDINVL VSKPMLVDLL
SVQAQIDGQT DAKAIVDQAS AGADMFAGMA VGSQLATLDG TNVVTKLHYA ANQVEFNGQK
MTVEQFVGFL MSKFGSIEQP Q