Gene Pfl01_0147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0147 
Symbol 
ID3717497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp177213 
End bp179309 
Gene Length2097 bp 
Protein Length698 aa 
Translation table11 
GC content65% 
IMG OID 
Productpeptidase M50 
Protein accessionYP_345880 
Protein GI77456375 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGC CGAACCTGCG TGCCGACCTG CAATTGTCGC CCGCGGCGCC GGCATTGGAC 
GGTTCGCCGC GCTGGACCCT GGCCGACCCG GTGCGCGGGC GCTACTTCAA GCTTGGCGCG
GCGGCGATGC GCCTGTTGCG TCACTGGTCG CTGGGCGATC CCGAACAAGT GCTGCGCGCT
GCCAATCGTG AACCGGGTTT GCCGCTGGAC GGCGTCGAGC TGGAGCAACT GCTGACGTTC
CTGCGCGGGC ATGACCTGAT CAGCGCCCTC GACGATCAGC AACGCGCCAG TTACTCACTC
AAGGCCCTCG CGCAACGCCA GAGCCTGTGG ACAATCCTGC TGCATCAATA CCTGTTTTTC
CGCATTCCGC TGTGGCGGCC GGATGCCTTT CTCAATCGGG CGTGGCCGTG GCTGGAGCGC
TTTGGGCCAA GGGTTTTGCG CTACGTTCTG CCGGCGACCC TGGCGCTCGG GGTGTTTCTG
GTGTCGCGGG ACTGGCAGCG GTTTGTCGGC ACCTTTCCGC ATCTGTTCAG CCTCGGTGGC
GCGATCGCGT TCGGCATCTC GCTGTTTTTT GCCAAGCTCT GTCACGAATT CGGTCATGCA
TTCATGGCCA AGCGCGCCGG GTGTCGGGTG CAAAGCATGG GCGTGGCGTT CATGGTCTTG
CTGCCGATGT TCTACACCGA TGTCAGCGAT GCCTGGCGGG TCAATGATCG ACGCGCGCGA
CTGCTGATCG GTGCCGGCGG GGTGCTGGCG GAGTTGCTGT TGGCGAGCAT CGCGCTGCTG
GTCTGGTCGT TCCTGCCGGA CGGGCCCGGT CGCACGGCGG CGTTCATGCT CGCCAGCGCG
ACCTGGATCA CCACGCTGGT GGTCAATCTC AACCCGTTCA TGCGATTTGA TGGCTACTTT
CTGCTCAGCG ATTTGTGGGA GGTCGACAAC CTTCAGGGCC GGGCCTTTGC CTTTTGCCGC
TGGCGCCTGC GTGAGTTCTT GTTCGGCTAT GGCGCGCCGG CGCCGGAGCC TTGGTCGCCG
ACGATGCAGC GGCGTTTGCT GATCTGGGGG TATGGCTCGT GGTTATGGCG TGCGGCGTTG
TTTTTCGGGA TCGCGCTGGC GGTCTATCAC CTGTTCTTCA AGGTGTTGGG GATCTTCCTG
ATGCTGGTCG AGCTGGTGTG GTTCATCTTC CTGCCAATCA TGAGTGAGTG GCGCCAGTGG
TGGAGCCGCC GCGAACAGGC TCATGGTCCC CGCGTGTTGC TCAGCAGCCT GGCGGTACTC
GGCCTGTTGC TGGTGCTGAT CGTGCCGTGG CGCAGCTCGG TCGAATTGCC GACGATGCTC
GAGGGCGGTC GCGCCAGTGC CTTGCACGCA CCGACGGCGG CGCGGGTCAA AGCCGTGAGG
GTGGCGGATG GTCAGACCGT GGCTCAGGGC GACGTGCTGA TCGAATTGGA ATCGCCGGAC
CTCGATTCGC GGCAGGCCAT CGTCCGCCGG GAAATCCGCA TTCAGCAATT GCTGATGCGC
CGTCAGGCCG GCCGCAGTGA AACCGCTGCC GACGCCGGCA TCGTCGAGCA GCGTCTCGCC
GAAGCGGTGG CGGAATATCG CGGCCTGACC GCCCAACGCG AACGTCTGCT GTTACGCGCG
CCCCACGCCG GCACCGTGCG TGATCTGCTG CCGAACCTGA CGCCGGGCCG CTGGCTGTCG
AGCAAGGATG CGCTGGCGCG GGTGGTCGAA GACGGCACGC GACTGCGCGG TTATCTGGCC
GAGGCCGAAC TGTGGCGAGT CAAGCCCGGC GCCACCGGGC GGTTTATCGC CGACGACCCG
ATGCATGCCG CCATCGCGGT GCAACTCAAT GAAATCGACA CCAACGGTGT GGCCTATGTC
GATCAGGAAG CGCTGACTTC CGATCACCAC GGGCCGATTG CCGTGCGCCG CGATCAACAG
CATCGAGCGG AACCGGTGCA GGCGCAATAT GGCGTGCGTT TGACTACGCT GGATCAGGCA
GCGACCCCGG TGCAACCGCT GCGCGGCGTG GTGGTGTTGC AGGGCAGTGG CGAGTCGGTG
CTCGGCGTGG CCTGGCGCCG GATGGCGGCG CTGGGGGTCA GGGAAAGCGG TTTCTAG
 
Protein sequence
MTLPNLRADL QLSPAAPALD GSPRWTLADP VRGRYFKLGA AAMRLLRHWS LGDPEQVLRA 
ANREPGLPLD GVELEQLLTF LRGHDLISAL DDQQRASYSL KALAQRQSLW TILLHQYLFF
RIPLWRPDAF LNRAWPWLER FGPRVLRYVL PATLALGVFL VSRDWQRFVG TFPHLFSLGG
AIAFGISLFF AKLCHEFGHA FMAKRAGCRV QSMGVAFMVL LPMFYTDVSD AWRVNDRRAR
LLIGAGGVLA ELLLASIALL VWSFLPDGPG RTAAFMLASA TWITTLVVNL NPFMRFDGYF
LLSDLWEVDN LQGRAFAFCR WRLREFLFGY GAPAPEPWSP TMQRRLLIWG YGSWLWRAAL
FFGIALAVYH LFFKVLGIFL MLVELVWFIF LPIMSEWRQW WSRREQAHGP RVLLSSLAVL
GLLLVLIVPW RSSVELPTML EGGRASALHA PTAARVKAVR VADGQTVAQG DVLIELESPD
LDSRQAIVRR EIRIQQLLMR RQAGRSETAA DAGIVEQRLA EAVAEYRGLT AQRERLLLRA
PHAGTVRDLL PNLTPGRWLS SKDALARVVE DGTRLRGYLA EAELWRVKPG ATGRFIADDP
MHAAIAVQLN EIDTNGVAYV DQEALTSDHH GPIAVRRDQQ HRAEPVQAQY GVRLTTLDQA
ATPVQPLRGV VVLQGSGESV LGVAWRRMAA LGVRESGF