| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0144 |
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| Symbol | |
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| ID | 3717494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 173582 |
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| End bp | 175033 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | RND efflux system, outer membrane lipoprotein, NodT |
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| Protein accession | YP_345877 |
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| Protein GI | 77456372 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.16245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCT TTCAGTCCCT GACAGTGGTC CTGAGTCTGT CGGCATTGGC GGCCTGCACC
GTCGGCCCGG ACTTCCAGAA ACCCCAAGCC ACGCAGATTG CCGAGTGGGC AAAGCCCTCA
AAAACCGCCG TCAGCCAGGC CGTCAGCGAA CCCTTGAACG AGCGCTGGTG GGAAGTCTTT
CACGACGCGC AACTCTCGGC CCTGACCCAG CGCGCCTTGC GCAGCAACCT TGACCTGCAA
CTGGCCAGCA GCCGCCTGCA ACAAAGCCGC GCCGCCCGCC AGGTGATCAC CGCCGACCGT
TATCCAACGA CCGCCGCCAC CGGCAGCTAT GCCCGCAAAC GCAACAGCGG CGAAGGCCTG
AACGACCCGT CCGGACACAA TGGCGATTCG GCCTTCAACC TGTGGGATGC CGGTTTCTCG
GCCTCCTGGG AGCTGGATTT CTGGGGCCGC GTGCGCCGGG AGACCGAAGC CGCCGATGCC
AACCTCGAAG TCGCGGAAAA CGACCGTCGC GGCGTGCTGT TGGCGGTACT CGCGGACACC
GCGCAGAACT ACATCCAGCT GCGCGGCGTA CAGAACACCC GCGCGGTCAC CGAGCAGAAC
CTCGATGTGG CGCGACACAG CCTGAAGCTT TCACAACTGC GCCTCAACGA CGGTGTGGCC
ACCGATCTCG ACGTCGCCGA AGCGGCCGCG CAAGTGGCGG CCATCGAATC GCGGTTGCCA
GCACTGGAGC AACGTCAGGC GCAACTGATC AACGCCATCA GCCTGTTGAT GGGCGAACCG
CCGCAGACGC TGGCGAAAGA GTTATCCACA GATGCGCCGG TGCCGCAGTC GCCGCTGACC
GTCGCCATCG GCCTGCCGTC GCAACTGGCC GAACGTCGCC CGGACATCCG CCAGGCCGAA
GCCCGTCTGC ACGCCGCCAC CGCCAACATC GGCGTGGCCA AGGGCGATTT CTATCCGCGC
ATCACCCTGT CCGGCAACCT CGGCTCGCAA GCCATGCAGC TCAGCGATTT CGGTTCCTGG
GGCTCACGCG CCTTCGGCAT CGGCCCGCAA TTCAGCCTGC CGCTGTTCGA CGGCGGCCGC
TTGCGCGGCG TGCTGCAACT GCGCGAAGCC CAACAGCAGG AAGCGGCCAT CGGTTATCAA
CAGACCGTCC TGCGCGCCTG GCACGAAATC GACGACCAGC TGACCGCCTA CAACGCCAGC
CAGCGCCGCC GCGACAGCCT CGCCGAAGCC GTGCGCCAGA ACCAGATCGC CCTGCGCACC
GCGCAACAGC AATACGTCGA AGGCGTGGTC GACTTCGTCA ACGTCCTCAC CGTGCAAGGC
GCACTGCTCG CCACCCAGGA ACAATGGGTG GAAAGCTCCA CCGGCGTTTC ACTGGCGATG
ATCGGGCTGT ACCGGGCGTT GGGCGGGGGA TGGGAGTCGG TGTATCCGGT GGGGGAGATG
GCGCAGCGTT GA
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| Protein sequence | MKRFQSLTVV LSLSALAACT VGPDFQKPQA TQIAEWAKPS KTAVSQAVSE PLNERWWEVF
HDAQLSALTQ RALRSNLDLQ LASSRLQQSR AARQVITADR YPTTAATGSY ARKRNSGEGL
NDPSGHNGDS AFNLWDAGFS ASWELDFWGR VRRETEAADA NLEVAENDRR GVLLAVLADT
AQNYIQLRGV QNTRAVTEQN LDVARHSLKL SQLRLNDGVA TDLDVAEAAA QVAAIESRLP
ALEQRQAQLI NAISLLMGEP PQTLAKELST DAPVPQSPLT VAIGLPSQLA ERRPDIRQAE
ARLHAATANI GVAKGDFYPR ITLSGNLGSQ AMQLSDFGSW GSRAFGIGPQ FSLPLFDGGR
LRGVLQLREA QQQEAAIGYQ QTVLRAWHEI DDQLTAYNAS QRRRDSLAEA VRQNQIALRT
AQQQYVEGVV DFVNVLTVQG ALLATQEQWV ESSTGVSLAM IGLYRALGGG WESVYPVGEM
AQR
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