Gene Pfl01_0139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0139 
Symbol 
ID3717882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp168134 
End bp168994 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content62% 
IMG OID 
ProductABC transporter-like 
Protein accessionYP_345872 
Protein GI77456367 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCC CTTTGCAAGG CCACGCGGCC AGCAACCCTA TCGCCACCGC ACAAGCGCTG 
CTGGCGGTCG ACCAGGTCAG CCTCGAATAC CGCACGCCGC AGCGCGTCGT GCGCGCCACC
CACCAGGTCA GTTTCGAAGT CGATCAACAG GATCGTTTCG TGCTGCTCGG CCCGTCCGGT
TGCGGTAAAT CCACGTTGCT CAAAGCCGTC GCCGGGTTCA TTACGCCGTG CGAGGGCGAG
ATCCGTCTGC AGGGCCAGCG CGTCGACGCG CCGGGGCCGG ACCGGATCGT GGTGTTTCAG
GAGTTCGATC AACTGCCACC GTGGAAAACC GTCAAACAGA ACGTGATGTT TCCGCTGCTG
GCTTCGCGCA CGCTGAAGAA AAAGGAAGCC GAAGAGCGCG CGCTGCATTA TCTGGAAAAA
GTCGGTCTGG CGGCGTTCGC CGATGCCTAT CCGCACACCC TGTCCGGCGG CATGAAAGCG
CGGGTGGCGA TTGCCCGGGC GCTGGCGATG CAGCCGAAAA TCCTGCTGAT GGACGAGCCG
TTCGCCGCGC TGGATGCCCT GACCCGGCGC AAGATGCAGG AGGAATTGCT GCTGCTCTGG
GAGGAGGTGC GTTTCACCCT GTTGTTCGTC ACCCACTCGA TTGAAGAAGC GCTGGTGGTC
GGCAATCGGA TCCTGCTGTT GTCGCCGCAT CCGGGGCGGG TGAGGGCGGA AGTGCACAGT
CATCAATACG ATTTGCACAG CCTCGGCAGT GTGGCGTTTC AGGAATCGGC GCGGCGCATT
CACCGATTGC TGTTCGATGA AGGGCAGTCG CCGGAAACCG AGCGCGAACT GGATTTCACT
GATATCCGCA TCGCTTATTG A
 
Protein sequence
MNAPLQGHAA SNPIATAQAL LAVDQVSLEY RTPQRVVRAT HQVSFEVDQQ DRFVLLGPSG 
CGKSTLLKAV AGFITPCEGE IRLQGQRVDA PGPDRIVVFQ EFDQLPPWKT VKQNVMFPLL
ASRTLKKKEA EERALHYLEK VGLAAFADAY PHTLSGGMKA RVAIARALAM QPKILLMDEP
FAALDALTRR KMQEELLLLW EEVRFTLLFV THSIEEALVV GNRILLLSPH PGRVRAEVHS
HQYDLHSLGS VAFQESARRI HRLLFDEGQS PETERELDFT DIRIAY