| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0131 |
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| Symbol | |
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| ID | 3717874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 142534 |
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| End bp | 144480 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_345864 |
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| Protein GI | 77456359 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.825955 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTGT TCAAACAGCT GTTGATCGCT ATCTGTCTGT TCCTGGTGGT CGCCTTCACC
GGCAGCTTCA TGGTCAGTCT GGAGAGCTCG CGCACCCAGT ACGTCAACCA GTTGCGCTCC
CACGCCCAGG ATGCGGCCAC GGCGCTGGCG CTGTCGTTGA CGCCGAACAT CGATGACCCG
GCGATGGTCG AGTTGCTGGT CAGTTCGATC TTCGACAGCG GTTATTACTC GAGCATCCGC
GTGGTCGATC TGAAGACCGA CCAGACCATC GTCGAGCGCA ACGGCATTCC GGCGGTCACC
AACGTGCCCG ACTGGTTCGT CAAACTGATC GGCCTGGAAC CGGCCGGTGG CGATGCGCTG
GTCAGCCGTG GCTGGGAGCA GGCGGCACGG GTCGAGGTAG TCAGCCACCC GATGTTCGCT
TTGGCCAAAC TCTGGCAGAG CGCACTGGGC AGCCTGGGCT GGTTGCTGGT CTGCGGCGCG
GTGAGTGCGG TGCTGGGCGC GTTGTTGTTG CGTCGGCAAT TGAAGCCGCT CGATTACATG
GTCAAGCAAT CCCACGCCAT CGCTCGTCGT GAGTTCCTGA GTCTGCCGGA CCTGCCGCGC
ACGCCTGAAT TGCGCCGCGT AGTGCTGGCG ATGAACCAGA TGGTCGAGAA GCTCAAGGCA
CTGTTCCAGG AGCAGGCCGA GCGCAGTGAA AAACTGCGTA CCGAGTCCTA CCAGGACAAC
CTCACAGGGT TGGCCAACCG GCGTTATTTC GAGATGCAGC TGAATGCGCG GGTGAGCAAC
CCGGAGCAGG CCAGTTCCGG TTATCTGCTG CTGTTGCGGG TCAAGGATCT GGCCGGGCTG
AACCAGCGCC TTGGCGGTCA GCGCACCGAT GAATTGTTGA AAGCGGTCGG CGAGCAACTG
TCCCGCGAGT GCGCCAAATA TCCGGAAACC CAGAACCTCG TCACCCGGAT TCGCGGTGGT
GAATTCGCCG TGCTGGCGCC GGGGATGACC CGCGAAGAGG CGCTGCAACT GGCGCAGAGT
CTCGACAGTG CCCTGAGCAG CCTGTACGCG ACGGGTGCCA CCGACGTGGC CGCCGTGGCT
TCTATCGGCC TGGCACCGTT CGCTCACGGC GATTCGCCGC AAGCGGTCCT CAGCCTCGGC
GATCAGGCGC TGGCCCAGGC CGAAGGGCAG GGCGAGCAGA ACTGGGCGTG CCTCGATCAG
AGCCTGGTGG CAGACGTCGG TGACGATCAC CACGCCTGGC ATCGCCTGCT CGATCAGGCG
TTGAATCAGC GGCGTTTCGA GCTGTTCTTC CAGCCGGTGG TGGCGGCGCA GGACACGCAA
CTGGTGCTGC ATTACAAGGT GCTGTCGCGC TTGCTCGACG AGCAGGGTCA GACCATTCCC
GCCGGGCGCT TCCTGCCCTG GCTGGAGCGC TTCGGCTGGA CCGCGCGACT GGACCGGTTG
ATGCTCGAGC GGGTGCTGGA GCAGATGGCC GGACATGAAG AATCTTTGGC GCTGAACCTG
TCCTCGGCGA CCCTGGCCGA TCCGCAGGCG TTGAACAAAG TGTTCGAGAT TCTGCGGGCG
CATTCCAACC TCGGAGCACG CCTGACCCTG GAAATCGGCG AGGAACAATT GCCGGAGCAA
GCGGTGCTGG AACAGCTGAC CCGGCGCCTG CGCGAGCTCG GTTTCTCCCT GAGCCTGCAG
CGCTTCGGCG GACGCTTCAG CATGATCGGC AACCTGGCGC GGCTGGGGCT GGCGTACCTG
AAGATCGATG GCAGCTACAT CCGGGCGATC GATCAGGAAA GCGACAAGCG GCTGTTCATC
GAAGCGATCC AGCGTGCGGC GCACAGCATC GATCTGCCGT TGATTGCCGA ACGGGTCGAG
ACGGAAGGGG AATTGTCGGT GATTCGCGAG ATGGGGTTGT ATGGGGTTCA GGGGCAGCTG
TTCGGTGAGC CAAAACCCTG GGGCTGA
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| Protein sequence | MSLFKQLLIA ICLFLVVAFT GSFMVSLESS RTQYVNQLRS HAQDAATALA LSLTPNIDDP
AMVELLVSSI FDSGYYSSIR VVDLKTDQTI VERNGIPAVT NVPDWFVKLI GLEPAGGDAL
VSRGWEQAAR VEVVSHPMFA LAKLWQSALG SLGWLLVCGA VSAVLGALLL RRQLKPLDYM
VKQSHAIARR EFLSLPDLPR TPELRRVVLA MNQMVEKLKA LFQEQAERSE KLRTESYQDN
LTGLANRRYF EMQLNARVSN PEQASSGYLL LLRVKDLAGL NQRLGGQRTD ELLKAVGEQL
SRECAKYPET QNLVTRIRGG EFAVLAPGMT REEALQLAQS LDSALSSLYA TGATDVAAVA
SIGLAPFAHG DSPQAVLSLG DQALAQAEGQ GEQNWACLDQ SLVADVGDDH HAWHRLLDQA
LNQRRFELFF QPVVAAQDTQ LVLHYKVLSR LLDEQGQTIP AGRFLPWLER FGWTARLDRL
MLERVLEQMA GHEESLALNL SSATLADPQA LNKVFEILRA HSNLGARLTL EIGEEQLPEQ
AVLEQLTRRL RELGFSLSLQ RFGGRFSMIG NLARLGLAYL KIDGSYIRAI DQESDKRLFI
EAIQRAAHSI DLPLIAERVE TEGELSVIRE MGLYGVQGQL FGEPKPWG
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